Gossypium raimondii: 105786802
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Entry
105786802 CDS
T04129
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105786802
03009 Ribosome biogenesis [BR:
gra03009
]
105786802
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105786802
Spliceosome [BR:
gra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105786802
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
90S particles
Helicases
105786802
Pre-60S particles
105786802
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
105786802
NCBI-ProteinID:
XP_012468734
UniProt:
A0A0D2LVG8
LinkDB
All DBs
Position
7:47055304..47060904
Genome browser
AA seq
604 aa
AA seq
DB search
MAVVEEKISKSPSLEDSKKKRKRKRNRANKAEHPNPDNNNDREEEKHEEDDAQAREVEIN
DKKNNNKKSKKLRSEEDDEQEERGNNEEEEEEQEGEKEEIKEKMNIGGSGIMSTESFESL
GLSEPTIKAIKEMGFQFMTQIQARAIPPLMVGKDVLGAARTGSGKTLAFLVPAVELLYNV
RFTPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSARRGEAERIVKGVNL
LVATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKYLPKQNRQTALF
SATQTKKVEDLARLSFQTTPIYIDVDDGRKKVTNEGLQQGYCVVHSSKRFILLYSFLKRN
MSKKVMVFFSSCNSVKFHAELLRYIHVDCLDIHGKQKQQKRTTTFFDFCKAEKGILLCTD
VAARGLDIPAVDWILQYDPPDEPKEYIHRVGRTARGEGAKGNALLFLIPEELQFLRYLKS
AKVPVKEYEFDEKKLANVQSHLEKLVENNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHR
LDLQAVAASFFFSCPPKVNLNIDSNASKSRKKMRKVEGTRNNFSESNPYGRQGSEAETRQ
FVRY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgtggaagagaaaatctcaaagtctccctctttagaagatagtaagaagaaa
aggaagcgaaagcgaaacagagctaataaagcagagcacccaaaccctgataacaacaat
gacagagaagaagagaaacacgaggaagatgatgcacaagcgagagaagttgaaatcaat
gacaaaaagaataataataagaaaagcaagaagttgaggagtgaagaagatgacgaacaa
gaggaaaggggaaacaatgaagaggaagaagaggaacaagaaggagagaaggaagagata
aaggagaaaatgaatattgggggaagtgggataatgagcaccgagtcatttgagtctttg
ggattgtctgaacctactattaaagctattaaagaaatgggttttcagtttatgacccag
attcaagctagagcaattcctccacttatggttggcaaagatgttcttggggctgcaagg
acaggttctgggaaaacccttgccttcttggtacctgctgttgaattgttatataatgtc
cgattcactcctcgcaatggaacaggtgttattgtgatttgtcccacaagggagcttgca
attcagactcatgcagtagcaaaggatcttctcaaataccactctcagacccttggattg
gttattggcggttcagccagaagaggagaagcagagcggattgtgaagggagtaaatttg
ttagtggctactcctggtcggctacttgaccatcttcaaaatacaaaaggattcatttat
aaaaatttgaagtgtctcatgattgatgaagctgacaggatattggaagcaaattttgag
gaagaaatgaagcaaattatcaagtatcttcccaagcaaaacaggcaaacagctcttttt
tcagctacccagactaaaaaggttgaggaccttgcccgcttgtcatttcagacaactcct
atttatattgatgtagatgatgggagaaagaaggtcaccaatgaaggcctgcagcaaggc
tactgtgttgtgcatagttccaagagatttatccttttgtattcgtttttgaagaggaac
atgtccaagaaagtgatggtctttttctcttcatgcaactcagtcaaatttcatgctgaa
cttcttagatatattcatgtggattgtcttgatatccatggaaagcagaaacagcaaaaa
cgaaccactaccttctttgacttctgcaaagcagaaaagggcattttgctttgcactgat
gttgctgctcggggacttgatatacctgctgtggattggattctgcagtatgatcctccg
gatgaaccaaaggaatatatccatagggttggtcgaactgcccgtggggaaggtgcaaaa
ggaaatgctcttctgttcttgatcccagaggaactgcaatttcttcgctatctaaagtca
gcaaaagttcctgtaaaggaatatgagtttgatgagaagaaactggcaaatgtgcagtct
catctggagaagttggtagaaaacaactattatctaaacaagtcagctaaagatgcatat
cgatcctatattttagcgtacaattcacactcaatgaaagatatctttaatgtgcatcgg
cttgatctgcaggcggttgctgcttccttcttcttttcatgccctccgaaagttaatctg
aacatagacagcaatgcatcaaaatctagaaagaaaatgcgcaaagttgaaggaacccga
aacaatttcagtgaaagcaacccttatggaaggcagggaagtgaagccgaaacacggcaa
tttgtgaggtattaa
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