KEGG   Gossypium raimondii: 105787372
Entry
105787372         CDS       T04129                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
gra  Gossypium raimondii
Pathway
gra03020  RNA polymerase
gra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105787372
  09124 Replication and repair
   03420 Nucleotide excision repair
    105787372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gra03021]
    105787372
   03400 DNA repair and recombination proteins [BR:gra03400]
    105787372
Transcription machinery [BR:gra03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     105787372
  RNA polymerase III system
   RNA polymerase III
     105787372
  RNA polymerase I system
   RNA polymerase I
     105787372
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105787372
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DNA_pol3_alpha
Other DBs
NCBI-GeneID: 105787372
NCBI-ProteinID: XP_012469213
UniProt: A0A0D2PK01
LinkDB
Position
7:52870197..52873076
AA seq 206 aa
MVLSDDEIRRLFRIRKTVLQLLKDRDYFVGDFEINMSREQFISKFGENMKREDLVINKAK
RNDSSDQIYVFFPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISSK
FHLEVFQETELLVNVKEHSLVPEHQVLTTEEKKTLLQRYTVKETQLPRIQVSDPIARYYG
LKRGQVVKIIRPSETAGRYITYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggttctgtcggacgatgaaatcaggaggttgtttcgtatccgaaagacggtattgcag
ttgttgaaagacagagattacttcgttggagatttcgagattaacatgtctagagaacaa
tttatttccaaattcggcgaaaacatgaaaagggaggatctggttattaataaagctaag
cgaaacgatagctctgatcagatctatgttttctttcctgaagaacccaaggttggtgtg
aaaacaatgaagacatataccaaccgcatgaaatcggagaatgtatttagggctatactg
gttgtgcaacaaaatttgactccctttgctcggacttgtatcaatgaaatttcttccaaa
ttccacttggaggttttccaggaaacggagctccttgtcaatgtaaaagaacattctctt
gttccggagcatcaggtgcttactaccgaggagaaaaagactttgctgcaaagatatact
gtaaaggaaacacagctgccgcgtatccaggtgagtgatccgatcgcaagatactacggg
ctgaagcgtggacaagtggtgaagataattaggcctagcgagactgctggtcgttatatt
acctatcggtatgtggtgtga

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