Gossypium raimondii: 105787400
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Entry
105787400 CDS
T04129
Name
(RefSeq) ubiquitin domain-containing protein DSK2b isoform X1
KO
K04523
ubiquilin
Organism
gra
Gossypium raimondii
Pathway
gra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105787400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105787400
03051 Proteasome [BR:
gra03051
]
105787400
Membrane trafficking [BR:
gra04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
105787400
Proteasome [BR:
gra03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105787400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
Ubiquitin_2
UBA_7
STI1-HOP_DP
Rad60-SLD_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
105787400
NCBI-ProteinID:
XP_012469221
UniProt:
A0A0D2QL05
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Position
2:complement(176575..180525)
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AA seq
546 aa
AA seq
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MGGGDINASKEAASKDVGDAVTVSINCSSGSKFSVQTNLDSTVDSFKALLARNCGVPADQ
QRLIYKGRILKDDQTLRSYGLEADHTVHLVRSVAPTAPPLTTNAAGSIGSGALSTSQTNT
TAVDLDDAGALGAGGAGLGASLFPGLGDSAGLFGAGLPNFEQLQQQLTRIPNIMREISNM
PAIQNLMNNPEILYNLIMNNPQTREIIDRNPELAHILNDPSVLLQTFEAARNPELMREVI
RNTDRAMSNIESSPEGFNMLRRMYETVQEPLLNATTMTGTTGNGGSNPFSSLLGTQGGNQ
ARDGSTNQPTSDSGTTPNANPLPNPWSSSEVGGSQTNTRRSDPGADARPQAPAGLGGLGL
PAFEGLFGAMQDSNSLNQLMQNPAISQMMRSLLSSPQYLNQVLSLSPQLQNMLGSNSQPR
EMMQNSQFLHQLTSPEMMQQLLTLQQTLFSQLSRPQSTQEPAQTGGGAGTLNMGLEAMMT
MFSGLGTGSLGVPNRSDVPPEQLYATQLSQLQEMGFIDTRENIQALIASAGNVHAAVERL
LGNPGQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggtgatattaatgcttctaaggaagcggccagcaaagacgtcggtgatgct
gtcaccgtcagtatcaattgttcatccggctccaaattctccgttcagaccaacctggat
tccaccgtcgattcgtttaaggcacttctggcgcgaaactgcggtgttcccgccgatcaa
cagcgtttgatttataaaggtcggatcttgaaggacgatcaaacccttcgaagctacggt
ttggaggcagatcacactgtccacttggttcgttctgttgcaccgacagcgccaccgctg
acaaccaatgcagctgggtcaattggttcaggtgctttgagcacttctcaaacaaataca
acagctgttgacttggatgatgctggggcattgggagcaggaggggctggtctaggtgct
tcactgtttcctggacttggtgacagtgctggtttatttggagctgggctcccaaatttt
gaacaattacaacagcaattgactcgaatccccaacattatgagggaaatatcgaacatg
cctgctattcagaatttgatgaataatcctgagatactgtataacttgatcatgaacaat
cctcaaacgcgagagataattgaccgaaatcctgagcttgcacacatacttaatgatcca
agtgttctccttcaaacatttgaagctgcaagaaaccctgagctcatgcgtgaagtgatt
aggaatacggacagagcaatgagcaatattgaatcatcacccgaaggatttaacatgctt
cgccgtatgtatgaaactgttcaagagcctctcctgaatgcaactactatgactgggact
actggaaatggtggttcaaacccgttttcttccctcctgggaactcaagggggaaaccaa
gccagagatgggtcaactaaccagcccacctctgattctggaactactcccaatgcgaat
ccactgccaaacccttggtcttcttctgaagttggaggttcccaaactaacacaaggagg
tcggatcctggtgcggatgctaggccacaggcacctgctggtttaggtggtctgggtctt
ccagcgtttgaaggcttgtttggtgctatgcaggattctaattcactgaatcagttgatg
caaaatccagctatttcacaaatgatgcgaagcctcctgtccagtcctcagtacttgaac
caggttcttagtctcagtcctcaacttcaaaacatgcttggttctaattctcaaccaaga
gaaatgatgcagaactctcaatttcttcatcagttgacttctcctgagatgatgcagcaa
ctattgactttgcagcagactcttttttcacaacttagtcggccacagtcaacccaggag
cctgcccagactggtggaggtgcaggaacgctcaacatgggtttggaagcaatgatgacc
atgtttagcggacttggaaccggcagcttgggtgttcctaatagatcagatgtacctcca
gagcaactatacgccacccagttgtcccaacttcaagaaatgggtttcattgacactcga
gaaaatattcaggcattaatagccagtgcaggaaatgttcatgctgcggtggaacggtta
ctgggaaatcctggtcagtaa
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