Gossypium raimondii: 105787523
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Entry
105787523 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105787523
KO
K10756
replication factor C subunit 3/5
Organism
gra
Gossypium raimondii
Pathway
gra03030
DNA replication
gra03410
Base excision repair
gra03420
Nucleotide excision repair
gra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105787523
03410 Base excision repair
105787523
03420 Nucleotide excision repair
105787523
03430 Mismatch repair
105787523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gra03032
]
105787523
03036 Chromosome and associated proteins [BR:
gra03036
]
105787523
03400 DNA repair and recombination proteins [BR:
gra03400
]
105787523
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105787523
DNA Replication Termination Factors
ELG1-RFC complex
105787523
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105787523
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105787523
Check point factors
HRAD17(Rad24)-RFC complex
105787523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
Rad17
AAA_16
DNA_pol3_delta2
RuvB_N
TIP49
Motif
Other DBs
NCBI-GeneID:
105787523
NCBI-ProteinID:
XP_052483717
LinkDB
All DBs
Position
2:complement(883013..886296)
Genome browser
AA seq
760 aa
AA seq
DB search
MESLSRSNSKGGQPHVLVPLKQRRSGYEPSDTETEWQESPWHDHNNQNNGTSDLVEADNI
KSNFPRNLSPLKLSRRQILKVDYDKGSPPRTNPLLRRHGSSKSPYKTRRDDGQNISPLPK
PEHRRHVSPYKQGRVEHTLNDGTGNGEIAGLNMKQSCRSPTRDEIKMIGQLIEGGRGSAK
SNYRRSVTAPPRQRGERTPSPIGRNMFRKQREASLGKQQSVGEINEIVANAKIPKSPTYN
DAILESTESISPGDIFFSRDAAALAMQKKGLPNNGGFGNHVVPKPPLLPRKDPTSHQRIM
ANRNIDPKARSNTGLSRTTMTPSSATSRRSSLNSKLSDTSGSSLNSEKFAANRRKRQDET
WFGCVMRRGSCRTSKKSPKRETQSFDEASFIGKAFVVEKLRQFWADKYQPASLNGFTCHK
QETQLLKQLVSASHENCPHILLKGPSGSGKKALTMASLREMYGDASWNVSHELRQFQVQE
KKPKQVHVSIASSAHHVQLNVHLETNAKYALMGLVKEISTNFTTIPEVSNDYFKINFKVL
VLYDVDKAPENIHHLIKWIMDCHSDSCKFIICCEDDISILESVKSRCKVIKVDAPATHEV
MEILIQIARKEDFELHMNFAAKIAAKSKQNLRKAIMALEACKAHNYPFADDQPIPLGWEE
VLTELATEILADPSHKRLPFVRLKLQKLLGDFVHPKLVLQKLVEEFLKKVEVGLKRELYY
WHGYYEKRLPTGTSALLKLEEFVAKFIGIYRKSSGNNQFV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggagagcttgtcaaggagcaatagcaaaggtggccagcctcatgtgttagttccattg
aagcaaaggcggagtggatacgagccgtcagatacggagactgagtggcaagaaagtccc
tggcatgatcataataaccaaaacaacgggacatcagatcttgtcgaagcggataacatt
aagtccaattttccgagaaaccttagtcctttgaaactgagccgaagacagattctgaag
gttgattatgataaagggtctcctcctagaactaatccacttttaaggagacatggaagc
agcaagtctccttacaagacacgaagggatgatggtcagaacataagccccttgccgaaa
cccgagcatcggcggcatgtctctccttataaacaggggagagtggagcatacattgaat
gatggcacgggaaatggtgagattgctggcttaaacatgaagcaaagttgtagatctcct
acaagagatgaaataaaaatgatcgggcagcttatcgagggtggtagagggagtgcaaaa
tcaaactatcgtcgatcagtgactgcaccgccgagacaaagaggggagaggacaccgtca
ccaatcggaaggaacatgtttcgtaagcaaagagaagcttccctcgggaaacaacaatca
gtaggtgaaatcaatgaaatagttgcaaatgcaaagattcctaaaagtcctacatataat
gatgccattctcgaaagcacagagtccatttcacctggtgatatcttcttttctcgtgat
gctgcagctttggcaatgcagaagaaaggcttgccaaacaatggtggcttcggaaaccat
gttgtccccaagccaccattgttgccccgaaaagaccccacttcccatcaacgaataatg
gccaaccgaaatatcgatccaaaagctcggtcaaacaccggtttatcaagaacaactatg
actccaagttcagctactagcagacggagtagtttaaactccaagcttagtgatactagt
gggagtagtttaaactcggagaagtttgcagccaatagacgaaagaggcaagacgaaacc
tggtttggatgtgtaatgaggagaggatcctgcaggacctcaaaaaaatcacccaaaaga
gaaacacaatccttcgatgaggcctcgttcattgggaaggcatttgttgtcgaaaaactg
aggcagttttgggccgataaataccaaccagcttccttgaacggattcacctgtcacaaa
caagaaactcagcttctgaagcaactagtaagtgcatcccatgagaattgtcctcatata
ttgctcaaaggaccatctggttcagggaaaaaagcactaacaatggcttccctgcgcgaa
atgtatggtgacgctagctggaatgtatctcatgaattaaggcaattccaggttcaggaa
aaaaagccaaagcaagttcatgtttcaattgcttcaagtgctcatcatgtacagcttaat
gtacacttggaaacaaatgcgaaatatgcattaatgggattagttaaggaaataagcacc
aattttaccactatcccagaagtcagcaatgattatttcaagataaacttcaaagtttta
gttctttatgatgttgacaaggcaccagagaatattcatcacttgatcaaatggatcatg
gactgtcattcggattcgtgtaaattcataatctgctgtgaagatgacataagtatccta
gaatcagtaaagagtcgctgcaaagttataaaagtagatgccccggcaacacatgaagtc
atggagatacttatccaaattgcaaggaaagaagactttgaactacatatgaactttgct
gcaaagattgctgccaaatcaaagcaaaacctgaggaaagcaatcatggcacttgaagcc
tgcaaagcacacaactatccttttgctgatgaccaacctattccactcggatgggaagag
gtcttgacagaacttgcaactgaaatcctggccgatccatcgcataaaaggttacctttt
gtaaggcttaagcttcaaaagcttcttggggactttgttcatcctaaactggtcctccag
aagctggtagaagagtttcttaagaaagttgaagttggtttaaaaagggaactttattac
tggcatggttactatgaaaagagactcccaacaggaacaagtgctttgttgaaactagaa
gagtttgtggccaagtttataggcatatataggaagagttctggtaataatcagtttgtg
taa
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