Gossypium raimondii: 105787552
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Entry
105787552 CDS
T04129
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1
KO
K25869
zinc finger protein IDD1/2
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105787552
Transcription factors [BR:
gra03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105787552
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
105787552
NCBI-ProteinID:
XP_012469451
UniProt:
A0A0D2MI11
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Position
2:1112016..1115052
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AA seq
549 aa
AA seq
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MPVEVDNSSTVSGDASVSSTGNQNPPPKSAVKKKRNLPGMPDPDAEVIALSPTTLLATNR
FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVKKRVYVCPEPTCVHHDPSRALGD
LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTVFSRRDSFIT
HRAFCDALAVESAKTQTNPSSESDPKVQAADSSPRRSPPAAPPPVSAPSAITSSDIRIQS
SVLAEDPRTVVEEAPTPAPAPAPPPAGLNGSSSSSVSLVSSGCSSSSSSSSVFSSLFTST
TVSASIHPPQPLAPAPPLVGLNGSCSGSVSLVSSGASSSSSSGVFASLFASSTVSASIQP
PQPPALTNLIQADLAPSTSIEPISLCLSTSHGSSIFGTTGQERRQHAPPLQPAMSATALL
QKAAQMGAAASNASLLRGLGIVSSSAPQENLQWGQAQVDPDNASIAAGLGLGLPCDGSSG
LKELMMGTPVFGPKQTTLDFLGLGVAAGGNPNASLSALITSIGGGFDATTAAASFRGGDY
TSKDIGRSS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgccggttgaggttgacaattcctccaccgtctccggcgacgctagcgtctcttccacc
ggtaatcaaaatccacctcccaaatccgccgttaagaagaaacgtaacctccctggaatg
ccagatccagatgcggaggtgattgctttatcacctacgactctgttagctacaaaccgt
ttcgtgtgtgaaatttgcaacaaagggtttcaaagagaccaaaatcttcagcttcataga
cgaggtcataatctgccatggaagttgaggcaaagatcgagcaaggaagtgaagaagagg
gtttacgtttgtcctgagccgacatgtgttcatcatgacccttcgagagctttaggtgat
ctcacggggattaagaaacatttctgtagaaaacatggtgaaaagaaatggaaatgtgat
aaatgttctaagaaatacgctgttcaatcggattggaaagctcactctaagatctgtggc
actcgagagtataaatgtgattgtggaactgtgttttccaggagggatagttttattacc
cacagagctttttgtgatgcgttagcagtggagagtgctaaaactcaaacgaatcctagt
tcagaatccgacccaaaagttcaggcggcggattcatcaccacggcgctcacctccggct
gcacctccgccggtatctgctccaagtgctataacttcttcagatattcggattcaaagt
tctgtgttggctgaagatccaagaactgttgtggaagaagctcccactccagcaccggca
ccggctccaccaccggctggcttaaatggaagttctagcagtagtgttagcttggttagc
agtggttgtagcagcagcagcagcagcagcagtgtattttcgagcttatttacatccact
actgtatctgcgagcatacaccctcctcaacctctggcaccggctccaccactggttggc
ttaaatggaagttgtagcggtagtgtcagcctggttagcagtggtgctagcagcagtagc
agtagtggtgtatttgcaagcttatttgcctcctcgactgtatctgcaagcatacaacct
cctcaacctccggctttaaccaacttaattcaagctgacctagctccatctacatcaatt
gaaccaatttctttatgcctctcgaccagccatggctcgtcgatattcggaactacaggg
caagagcgtcggcagcatgcaccgccactgcaacctgctatgtctgccactgcactactg
cagaaagctgcacagatgggagcagcagcaagtaatgcatccttgcttcgcggtctcggt
attgtttcatcttcagcaccacaagaaaatttacaatggggtcaagcacaagttgacccc
gacaatgcctccattgcagcagggcttggactcgggcttccctgtgacggaagttcagga
ttaaaggaactgatgatgggaaccccagtcttcggtcctaagcaaactactctcgatttc
cttgggttgggggtggctgccggtggcaaccccaatgccagcctgtctgctctaattacg
tctatcggaggtggatttgatgccaccacagcagcagcatcgtttcgaggtggagattac
accagcaaggacattggaagaagctcgtga
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