Gossypium raimondii: 105787888
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Entry
105787888 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105787888
KO
K13091
RNA-binding protein 23/39
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105787888
Spliceosome [BR:
gra03041
]
Common components
Common spliceosomal components
General mRNP proteins
105787888
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
105787888
NCBI-ProteinID:
XP_012469939
UniProt:
A0A0D2MJC8
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Position
2:6663251..6669162
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AA seq
579 aa
AA seq
DB search
MDFDEYEYLEKTVEEQEDSKKKTKDGGGAGDKSERSYRKRDSERDEEDDEGKSSSKKSRS
GREEDDEERRDRDKDRRRSSRDRERERERDRDRDLERRSSRGREKEKDRERDRERERRDR
DKEKEKEKERDKERREREKERERRERQKEKERERERRERSSSRSRRHESELEREKERDRE
RDIDIRDSRKFKDKKEATEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRL
IMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSGAGT
GGVAGPYGAVDRKLYVGNLHFNMTEMQLRQIFEPFGPVELVQLPLDLETGQCKGFGFVQF
AQLEHAKAAQSALNGKLEIAGRTIKVSSVTDHVVTQDTAAKSADFDDDEGGGLALNAQSR
ALLMRKLDRSGIATSITGSLGVPLLNGSAPSPQAVTLPVNGQAAYPTPILPPIMSTTALD
SVGQPSECLLLKNMFDPATETEPDFDLDIKEDVEEECSKYGRVKHIYVDKNSAGCVYLRF
DSAEAAGKAQRAMHMRWFAGRSISALFMQPQEYEARFKC
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgagtatttggagaaaaccgtggaggagcaggaagattcgaag
aagaagaccaaagacggaggaggagcgggggataagagcgagagaagctataggaagaga
gatagcgagagagatgaagaggatgatgaaggcaagagcagtagcaagaaatcgagaagc
ggtcgcgaagaggacgacgaggagaggcgagatcgtgacaaagatcggcgtagaagcagc
cgcgatagagaaagggaaagggagagagatagggatagagatttagagaggaggagcagt
agaggaagggaaaaggaaaaagatagagaaagggatagggaaagagaaaggagagatagg
gataaggagaaagagaaagagaaagagagagataaggagaggagagagagggaaaaggag
agagagaggagggaaaggcagaaggagaaggaaagggagagagagaggagagagagaagc
agcagtaggtcgaggaggcacgagagtgagctcgagcgagagaaggagcgggacagagaa
cgtgacattgacatcagagacagcaggaaatttaaagacaagaaggaagcaacagagcct
gaagctgatcctgagagggaccagagaaccgtttttgcttatcagatgcctctaaaagca
acggagagagatgtctatgagttcttctcaaaagcaggaaaggtgagggatgttcggctg
atcatggataggaactcaagacgatcaaagggagttgggtacattgagttttatgatgtg
atgtctgttccaatggcaatagcgttgtctggtcaactgcttcttggtcaacctgtgatg
gttaaaccttctgaggctgaaaagaatcttgttcagtccaatacttctggtgcaggcaca
ggaggtgttgctgggccatatggagctgttgatagaaaattgtatgtgggtaacctgcac
ttcaatatgacagaaatgcagcttagacagatatttgaaccttttggcccagttgagctt
gtacaactaccacttgaccttgagactgggcagtgcaaaggttttggatttgttcagttt
gctcaacttgaacatgcaaaagcagctcaaagtgcattgaatggaaagctggagattgct
ggtcgaaccattaaggtttcatctgttactgatcatgttgttacccaagatactgcagca
aaatctgctgacttcgatgatgatgagggtggtggcttggccttgaatgctcagtcaagg
gcattgcttatgcggaagctggaccgctctggtattgcgacaagcattacgggctccctt
ggagtacccctccttaatgggtcagctccgagtccacaggctgttactttacccgtcaat
ggccaagctgcatatccaacaccaattctacctccaatcatgtctactacggcccttgat
tctgttggccagcccagtgaatgtttgctgctgaagaatatgtttgatcctgcaactgag
acggaaccagattttgatttggatattaaagaggatgtcgaagaagaatgcagcaaatat
ggcagggtgaagcatatatatgtagacaagaacagtgccggatgcgtctatctgcgattt
gactccgcagaagcggcaggtaaagctcaacgtgcaatgcacatgaggtggtttgcgggc
cgatcaatatcagccttatttatgcaaccccaggagtacgaagcgaggtttaaatgctga
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