Gossypium raimondii: 105788005
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Entry
105788005 CDS
T04129
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X3
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105788005
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gra01009
]
105788005
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105788005
03036 Chromosome and associated proteins [BR:
gra03036
]
105788005
Protein phosphatases and associated proteins [BR:
gra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105788005
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105788005
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105788005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ComGF
Me-amine-dh_H
Motif
Other DBs
NCBI-GeneID:
105788005
NCBI-ProteinID:
XP_012470121
LinkDB
All DBs
Position
2:10354958..10362710
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AA seq
515 aa
AA seq
DB search
MHGGDEVVAAPAGPPQPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDRGG
RVVLFERTDTKDHGVSRRDLERMDYLISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTANSALFLLSTNDKTIKFWKVQEKKVKKISDMNLDPSKAVGNGSIASSSSSSSPK
PCLANGSSLGGSYNYLSHDFSFPPGGLPSLHLPVVVTSQETNLVARCRRVYGHAHDYHIN
SISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNM
LAYSSSKGSIRLIDLRQSALCDSHAKLFEEPEAPGSRSFFTEIIASISDIKFAKDGRYIL
SRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGS
YSNLFRVFGCAPGSTEATTLEASKNPMRRQVQTPSRPSRPLSSITRVVRRGTETPGVDAN
GNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaggcgatgaggtggtcgcagctccggcaggaccgccacagccgttggattgg
aaattctctcaggtttttggtgaaagaaccgctggagaagaagttcaagaagttgatatt
atttctgctattgaatttgataaaactggggatcatcttgccaccggtgaccgtgggggc
cgtgttgttctctttgagaggacagatacaaaggatcatggtgtatcaagaagggatctg
gagagaatggattatctaattagtcggcaccctgagtttcgttacaagacagagttccag
agccatgagcctgagtttgactacctcaagagcttggaaatagaggaaaaaatcaacaaa
atcagatggtgccaaacagccaatagtgccctttttctcctttccaccaatgataaaacc
atcaagttttggaaggtacaagaaaagaaagtcaagaaaatttctgacatgaatttggat
ccatcaaaagctgtaggaaatggcagcattgctagttcaagtagttcaagtagccctaaa
ccatgtcttgcaaatggaagctcccttggcggatcctacaactatttgagccatgatttc
tctttcccaccaggaggccttccatcgttgcatttacctgtggtagtaacaagtcaggag
accaacctagtggctagatgtcgacgggtatacggccatgcgcatgattatcacatcaat
tctatttcaaataacagtgatggagaaacttttatatcagccgacgatctacgtataaat
ctttggaacttggaaattagcaatcaaagtttcaatattgtcgatgtaaagcctgcaaac
atggaggatctaactgaggttataacatcagcagagtttcaccctacccactgtaatatg
ctagcatatagtagttcaaagggctcaattcgcctcattgatttgcggcaatcagctttg
tgtgattctcatgccaaattgtttgaagaaccggaggcacctggttctagatcatttttt
acggagataattgcctcaatctcagatattaaatttgcaaaggacggaagatatattctt
agccgtgattatatgactcttaagttgtgggatatcaatatggattctggtccagttgca
acattccaggttcatgaatatttacgacctaagctttgtgatttgtatgaaaatgattcg
atctttgacaaatttgaatgttgcctaagtggtgatggattgcgagtggcaacaggctcc
tacagcaatctattccgtgtatttggttgtgcccctggaagcaccgaggcaacaactttg
gaagctagcaaaaatccaatgaggagacaagttcagactccctcaaggccttccagaccc
ctgagcagtataacacgtgttgttagacgaggaacagaaactcccggagtggatgcgaat
ggaaattctttcgatttcacaacaaagttactgcacctagcatggcacccaactgaaaac
tcaattgcctgtgctgctgcaaacagcttgtacatgtactatgcataa
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