Gossypium raimondii: 105788017
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Entry
105788017 CDS
T04129
Name
(RefSeq) protein PAF1 homolog isoform X1
KO
K15174
RNA polymerase II-associated factor 1
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105788017
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
105788017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Tudor_5
Motif
Other DBs
NCBI-GeneID:
105788017
NCBI-ProteinID:
XP_012470138
UniProt:
A0A0D2QGB2
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Position
2:complement(11045414..11050992)
Genome browser
AA seq
671 aa
AA seq
DB search
MASYRSFPPQSFPPPPPPNQNPLPPQQHYDQNYNQMNLKSNYHYPSSRPPQQQQQPPPPP
PQQQYSYPPPPPPPPDSSYPPPPPPPLPTVPQNTFNSQPPIYYPPSQYSSQYGNQAMQPP
PPPPPPSSPGSSIPPPPPPSSPPPPPPPKESAGDKRLSERSKVGNRDFSGSGRREHGHSN
HRIAGREHKPMVPPVKNPNVHTGRVETEEERRLRKKRDFEKQRQEEKHRQQKKESQKAQL
MSSSKAHGSMIGSRMGDRRGTPFLSGERIENRLKKPTTFLCKLKFRNELPDPCAQPKLMA
LKKDKDRFTKYTITSLEKMYKPKLIVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDEELLR
DDVAITPIKKDGIRRKERPTDKGVSWLVKTQYISPLSMESTKQSLTEKQAKELRELKGGR
NLLENLNNRERQIKEIEASFEASKLRPVHATNKNLEPVEVMPLLPDFDRHNDQFVMVAFD
GAPTADSEIFSKLHDSVRDEHESRAIMKSYVAPSSDPANPEKFLAYMVPSLDELSKDMYD
ELEDISYSWVREYHWDVRGDGANDPTTYLVSFDEGDARYVPLPTKLNLRKKRAREGRSGD
EIEHFPIPSRITVRRRSTAAAIELKEPEVYSNTRDRNSRRLDAEDGVGRPRKLARHQDVG
QYSGDEDDFSD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtataggtcattcccaccacaatcctttcctcctccacccccaccaaatcaa
aatcctctcccaccccaacaacattatgatcaaaattacaatcaaatgaatttgaaatca
aattatcattacccttcttcaagaccgccccaacaacagcagcagccaccgcctccacct
ccacagcagcaatattcttatcccccaccgcctccgccacctccggattcttcctatcca
cctcccccaccccctcctctgccaacagtgccgcaaaataccttcaactcacagccacca
atatactatccaccttcacagtactcatcacagtatggcaatcaagcaatgcagccacct
cctccaccgcctcccccaagttctcccggttcttcaatccctccacctcctcctcccagt
tctcctccacctccgcctcctccaaaggagagtgctggggacaagaggttaagtgagcgc
agtaaagtggggaatagggatttttcaggttctggaaggcgtgaacatgggcattccaat
cacaggattgctggtagagagcacaagccaatggtgccccctgtaaagaacccaaatgta
catacaggaagagtggagacagaggaagagaggaggttgaggaagaagagggactttgag
aagcaaagacaagaggagaagcatagacagcagaagaaggagtcgcagaaggcccaatta
atgtcttccagcaaagcgcatggttcaatgataggctcacggatgggagataggagaggt
acaccatttttgagtggtgagaggattgagaatagattaaagaagccaactacgttcttg
tgcaagttgaaattccgaaatgaacttcctgatccatgtgcacagcccaaacttatggcc
ttgaagaaagataaagatcggtttacaaaatacaccatcacctctctagagaaaatgtac
aagcctaaacttattgttgagccagatctcgggataccactggatttgcttgacctcagt
gtgtacaatcctcctagtgttagacctcctcttgccccagaagacgaggaactcttgcgt
gatgatgtagctataacccctataaagaaagatggcataagacgaaaagaaagacccact
gataaaggtgtttcttggcttgttaaaacacagtacatttctccacttagtatggaatca
acgaaacagtctttgactgaaaagcaagcaaaagaactgcgagaacttaagggaggccgt
aatcttttggaaaaccttaacaatagggaaagacaaataaaagaaattgaggcatcattc
gaggcatccaagttacgtcctgtccatgcaaccaataaaaacttagagcccgttgaagtt
atgcctctcttacctgattttgataggcacaatgatcagtttgttatggtggcatttgat
ggtgctcctacagctgactcggaaatattcagcaagcttcatgactctgttcgtgatgaa
catgaatcaagggccattatgaaaagttatgtggcaccaagctcggatccagctaatcct
gagaaatttttggcatacatggtgccttcccttgatgagctgtcgaaggatatgtatgac
gagctcgaagatatctcatattcttgggttcgcgaataccactgggatgtgcggggtgat
ggcgcaaatgacccaacaacatacctggtttcattcgatgaaggagatgcccgctatgtg
cctcttccaacaaagcttaatttaagaaaaaagagggccagagagggaagatctggtgat
gagattgaacattttcctataccttccagaattactgtaaggaggagatcaacagctgct
gcaatagaactgaaagagccggaggtttattccaacacaagggacagaaattcgagaagg
ttggatgcggaagatggcgtgggaagaccacggaagcttgcacgacatcaagatgtgggt
cagtatagtggggatgaagatgacttctctgattga
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