Gossypium raimondii: 105788057
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Entry
105788057 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105788057
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105788057
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
105788057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
MiaE
Motif
Other DBs
NCBI-GeneID:
105788057
NCBI-ProteinID:
XP_012470200
UniProt:
A0A0D2QP13
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Position
2:12599163..12605203
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AA seq
629 aa
AA seq
DB search
MGLELPKYPEMEEDQVFNFTDSEIVSHVKQALASVLSGDNNSYNQLVGVMHHSKHLAPDE
VALLETTLKALAGAVSSIDITHHDSLLSAIYCMSMWNYGPHVADALAELIVSLAISNGKY
LDLCLGMLVSNFTPPPYFLDKLKMPHGLERKGQVLSRVHAAFKKIADYVPLAPLRLLTIV
LQGMPTIYHKDRAIVIYVENMLKLESGEIGELVGSTILMAVVDRLIELDVEIGWDAILQD
DFSKGIFEMELEDVDDIEESAEPDVGEFRLSRKSLAGNSIAELLDNLLVLTFEHLESCER
EGRLAKVFETLLQSFRVTVLSAYKSKFAQFVMFYACALDPENCGMRFATVLADLFVQDSQ
PQPTRMSAVSYLASYLSRAKFLAASSISSMLKRLVDWCLEYCEAHDGDINPNAHRVFYSG
CQAIMYVLCFRMKVFVDVPRLKSELLIPLEQVLKHKLNPLKVCLPSVVEEFLRQAKAASL
FTVCKTFIFDGLLESELSRAFGGLERLDTFFPFDPCLLKKCDSFIRPMFVFWSMVKPTYD
DAFDDDDDDDGSSDDDLVQDFVNENEDIMNDEFGKSFDEQGVDMDEFDYALKKMSITPKA
TSNYKFGGRFQEPARMPSRIRPSTSPESL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgggattggaattgccgaaatacccggagatggaggaagatcaagttttcaatttcact
gattcagaaatagtttctcatgtcaagcaagctctcgcctccgtcctatccggtgataac
aacagctataatcagcttgttggggtcatgcaccattccaaacatcttgcccctgatgag
gtcgccttactcgagactactttgaaggcactagctggggcagtatcttctatagatatt
actcatcatgactccctcctttctgctatttattgtatgagcatgtggaactacgggcct
catgtggcagatgcattagctgaacttattgtgtcccttgctatttcaaatggaaaatat
cttgatttgtgtctgggtatgcttgtgagcaatttcactccaccaccttatttcttggat
aaactaaaaatgccacatggtcttgagaggaagggacaagttctttctcgggtgcatgca
gctttcaaaaagatagctgattatgtccctcttgcccccttgagattattgaccatagtt
ctccaaggaatgccaacaatttatcataaggaccgagcaatagtaatttatgtggagaac
atgttaaaattagagagtggtgaaattggagaacttgttggaagcacaatacttatggct
gtggtggaccggctgatagaactagatgtggagattggatgggatgccattttacaagat
gactttagtaaaggcatatttgagatggagctagaagatgtggatgacattgaggaaagt
gctgagccagatgttggagagttccgattaagccgtaagagtctagctggaaacagcatc
gctgaactgctagataacctactggttttaacctttgaacatcttgaatcttgtgaaagg
gagggccgcttagctaaggtatttgaaacacttctccagtcatttcgggtaacagttcta
agtgcctacaagtcaaaatttgctcagtttgttatgttctatgcttgtgcattagatcct
gaaaactgtggtatgagatttgccacagtgctggcagatctatttgttcaagactcacag
ccccaaccaaccaggatgagtgctgtatcttatcttgctagctacttatctcgagcgaag
tttctggctgcctcttctatttctagcatgttaaaaaggttggtggattggtgcctggaa
tactgcgaagcccatgatggtgatataaatccaaatgcacatcgagttttctattctgga
tgccaggctattatgtatgtcctctgctttcgaatgaaagttttcgtggatgttccacgc
ttgaagtcagaacttctcataccattggaacaagtcctaaagcacaaattgaatcctttg
aaggtatgccttccatctgttgtggaagagtttctgcgacaggcaaaagcagcttctcta
ttcactgtgtgtaaaacgttcatttttgatgggctgctagagtcagaactttcaagggca
tttggtggcctggaaaggctcgacacattctttcctttcgacccttgtttgctgaaaaaa
tgtgacagttttatccgtccgatgtttgtcttctggtcaatggtaaaaccaacatacgat
gatgcttttgatgatgatgatgatgatgatggcagcagtgatgatgatttggttcaggat
tttgtaaatgaaaatgaggatattatgaatgatgagttcggaaagagctttgatgagcaa
ggtgttgatatggatgaatttgattatgcattgaagaaaatgtcgataacacccaaggct
acttctaattacaagtttggtggtcgatttcaagaaccggcaagaatgccttctagaatt
aggccctctacaagcccagagtccttatga
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