Gossypium raimondii: 105788140
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Entry
105788140 CDS
T04129
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X2
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105788140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105788140
03036 Chromosome and associated proteins [BR:
gra03036
]
105788140
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105788140
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105788140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
105788140
NCBI-ProteinID:
XP_012470337
UniProt:
A0A0D2QGV3
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Position
2:30995905..31004865
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AA seq
1019 aa
AA seq
DB search
MFGTTNPFGQSSSSPFASQSVFGQTSASSNPFAPKPSFGSPNPFGSQTGGSVFGGTSTGV
FGAAQSSSPFSSTTTFGASSSPAFGSSTPTFGSSSSSFGGSSVFGQKPAFGFGSSPTQSN
PFGSTNQQSQPAFGSGIFGSSTPFGSTQSAFGSSPAFGSTSSPAFGATSTLAFGASSTPG
FGATSTPAFGASSTPAFGATSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGG
TFGSSSSPAFGTSTTPAFGASSSAFGGSSTPAFGASSTPSFSFGSSPAFGQSAPAFGSSP
FGTTSFGAQSSPFGSQSSAPAFGSTSLGQSPFGGQRGGSRVAPYTPTTDADSGSGQPGAK
LESISAMPVYKDKSHEELRWEDYQLGDKGGPQPAAQATGGIGFGASTVSTSPFGSSTFGQ
TSANPFSSSSTNPFSLKPPSFNSTGFATSTTTSNPFQPTSSSLFGQASSTSLFSSSSTPT
FGTGSSLFGSSVTPSFSSSPSIFGTGAAPATTSAFATGSNFGSSQTSPLFNSSPAIGQAG
NAFGQMTSTFGQNTGNFGQTSIFNTPSTGFSGNMFSSSLSLAPSNPAAFGPTTPSFASPF
QPAQTSGAFSFSNFGQTQPGGGSGIFGQSNIGLSSATQTAAVVQPGTIINPYGTLPAMPQ
MSIGQAGTAPSVQYGISSMPVVDKPAPARISPLLTSRYLSQRRIRLPARKYHPNNNGPKV
PFFNDDEETPHTPKADAVFIPRENPRALIIRPTESWPSRASAEKASSLKVTSAAVHENGK
ISDGSSNAEDKNENPAENGHVKERIHPVKGNQKANGVHDDHSAQKESYMTLNGHRAGEAA
IVYEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGYCRHVKDFVVGRHGYGSIKFL
GETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKRTGQQYT
DGPKIEKYKEMLKRKAKDQGAEFISYDPIKGEWKFRVNHFSRYKLEDEDDVKMWGVADS
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtacaactaatccttttgggcaatcatcaagtagcccatttgcatcccaatct
gtttttgggcagaccagtgcaagtagcaatccatttgcacctaaaccttccttcggtagt
ccaaacccttttggttcccaaacagggggttctgtatttggaggtacttctactggagtg
tttggtgcggcccaatcttcttctcccttctcctcaacaaccacctttggtgcctcttca
tctccagcttttggttcatctactcccacttttggcagttcatcatcatcttttggtggg
tcttctgtttttggtcagaagcctgcatttggctttgggtcaagtcccacccaatcaaat
ccttttggaagcacaaatcagcaatcacagcctgcatttggtagtggtatatttggttcc
tccacaccttttggttcaactcagtcagcgtttggttctagtcctgcctttggttccact
agtagcccggcttttggtgcgacaagcacccttgcgtttggcgcctcaagcactccaggt
ttcggtgccacaagcacccctgcgtttggtgcctcaagtacccctgcttttggtgccaca
agcacccccgcgtttggtgccacgagcacccctgcatttggttcaactggaagtccagca
tttgggagcactggaactgcatttggtgtgtcaaatgccccagtctttggaactggaggt
acatttgggtcatcaagctcacctgcgtttggcacttccacaactcctgcttttggagct
tcaagttctgcttttgggggttcaagcactcctgcttttggagcatcttctactccatca
ttcagctttgggtctagcccagcttttggccaatcagcgccagcatttggaagtagtcca
tttggaacaacctcatttggagcccagagttctcctttcggaagtcaatcttctgcccca
gcatttggaagcactagtctcggccagtctccttttggaggtcaacgagggggaagtaga
gtagctccttacacacctacaactgatgcagatagtgggagtggacagccaggtgcaaag
ttggagtcaatttcagcaatgcctgtttataaagataaaagtcacgaggagctgagatgg
gaggattatcaattaggagataaaggtggaccgcagccagctgctcaggctactggaggg
attggatttggtgcgtcaactgtatctacaagtccttttggttcttcaacatttggccaa
acatctgcaaatcctttttccagctcaagtaccaacccatttagtttaaaacctccatcc
ttcaatagtaccggttttgcaacctcgactactacatcaaacccctttcaaccaacatca
tcaagcctttttggccaagcttcttcaacttcattatttagttcatcatctactcctaca
tttggaaccggttcatcactttttggctcatctgttactccttcattttcatcttcaccg
tccatttttggtactggtgcagctccagcaacaacttcagcatttgccacaggctcaaat
tttggcagcagtcagacatcacccctgttcaattcttcccctgcaattggacaggcaggc
aatgcttttggccagatgacctctacctttggacagaatactggtaacttcggtcaaaca
agcattttcaacacaccttccactggatttagtgggaatatgttttcaagctcactatca
ttggctcctagcaacccagcggccttcggcccaacaactccgtcttttgcttcacctttt
caaccagctcagaccagtggtgctttcagctttagcaattttggtcagacacaaccaggt
ggcggatcaggcatttttggtcagagtaatattggcctatcgtctgctacacagactgct
gctgtagtacaaccagggactattataaacccctacggaacactccctgcaatgcctcaa
atgtcaattggtcaggctgggactgcaccgtctgttcagtatggaatttccagcatgcct
gtggtggacaaacctgctcctgctagaatatcgcctttattgacttctcggtacctttcc
caaaggcggattaggttgcctgcaaggaaatatcatcctaataataatggtccaaaggtt
ccatttttcaatgatgatgaagagacaccacacacacctaaggctgatgctgtttttatc
cctagggaaaatccaagggctttgatcattcgtcccacagaaagttggccttcaagagct
tctgctgaaaaggcatcttcattgaaggttacatccgctgctgtgcatgagaatggcaaa
atttctgatggtagctccaacgctgaggataaaaatgaaaatccagccgaaaatggccat
gtgaaggagcgaattcacccagtcaaaggtaaccagaaagctaatggagtccatgacgat
cattctgctcagaaagagtcatacatgacactcaatggccacagagctggtgaggctgct
attgtctacgagcacggggcggacattgaggctttaatgccaaagcttaggcggtctgat
tactatacagaacctcgaatccaagaactggctgcaaaggaaagggctgaaccagggtac
tgtcggcatgtcaaggattttgtggttggacgacacggttacggaagcatcaagttcctg
ggtgagacagatgtgagacgtcttgatttggagtcccttgtgcagttcaacaaccgcgag
gtaatagtttacatggatgatagcaagaaacctcctgttggacaaggtctcaataagcct
gcagaggtaacacttcttaacatcaagtgttttgataaaaggacaggacagcagtataca
gatggtccaaaaatcgagaaatataaggaaatgcttaaaaggaaagccaaggaccaagga
gctgaatttatttcctatgatcccatcaaaggagagtggaaattcagggttaatcacttc
agcaggtataagttggaagatgaagatgatgtcaaaatgtggggtgttgcagatagctga
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