Gossypium raimondii: 105788455
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Entry
105788455 CDS
T04129
Name
(RefSeq) chaperone protein ClpB1-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gra03110
]
105788455
Chaperones and folding catalysts [BR:
gra03110
]
Heat shock proteins
HSP100
105788455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
bpMoxR
AAA_18
nSTAND3
AAA_7
AAA_14
ATPase_2
IstB_IS21
TniB
NACHT
RNA_helicase
NBD_SMAX1
DUF815
AAA_25
Zeta_toxin
AAA_19
ResIII
DNA_pol3_delta2
T2SSE
Torsin
DUF87
DUF2987
DASH_Spc19
AAA_13
Motif
Other DBs
NCBI-GeneID:
105788455
NCBI-ProteinID:
XP_052483278
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All DBs
Position
2:33513247..33517159
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AA seq
909 aa
AA seq
DB search
MNPDKFTHKTNEALAGAHELATSNGHAQFTPLHLAVALISDSQGIFYQAISNSGGDRVAQ
SVDRVFNQALKKLPTQSPPPDQVPASSSLVKAIRRAQAAQKSRGDTHLAVDQLILGLLED
SQITDLLKEAGVTPAKVKSELEKLRGKEGKKVESASGDTTFQALKSYGTDLVEQAGKLDP
VIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLVA
LDMGALIAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG
HHGVRIQDRALVIAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
MQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLLPLMMKYRKEKERVDEIRRLKQKR
EELMLALQEAERRYDLARAADLRYGAIQEVESALAQIEGTADENIMLTETVGPEHIAEAV
SRWTGIPVTRLGQNEKERLIVLAERLHQRVVGQNQAVDAVAEAVLRSRAGLGRPQQPTGS
FLFLGPTGVGKTELAKSLAEQLFDDENLLIRIDMSEYMEQHSVARLIGAPPGYVGHEEGG
QLTEAVRRRPYSVVLFDEVEKAHLSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL
GAEHILSGLSRKCTMQVARDRVMQEVRRHFKPELLNRLDEIVVFDPLSHDQLRKVARLQM
KDVASRLAERGIALAVEDSALDYILAESYDPVYGARPIRRWLEKKVVTELSRMLVKEEID
ENSTVYIDAPNGSELVYRVEKNGGLVNAETGQKADVLIRIPNGTRRSDAAQAVKKMKIEE
IDDEDEMDS
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgataaattcactcacaagacgaatgaggctcttgccggggctcatgagcta
gcaacgagcaatggccatgcccaattcactcccctccatcttgcggttgctttaatatcc
gactcccaaggcatcttttatcaagcaatctccaactccggaggtgatagggtcgcacaa
tccgtggatagggtattcaatcaagccttgaaaaagcttccaacacagtcacctccacca
gatcaagtccctgctagttcttctcttgttaaggcaatccgtcgcgcccaagccgcccaa
aagtctcgcggggatacccatttggcggtcgatcagttgattctaggcctccttgaggat
tctcagattacggatttgttgaaagaagcaggggttacaccagcaaaagtgaaatccgag
ctcgaaaagcttcgaggaaaagaagggaaaaaggtggagagtgcatcaggggacactaca
tttcaagctttaaaatcatatgggactgaccttgttgagcaagcagggaagcttgatcct
gtaataggccgagatgaagaaattagaagggtcattaggatcctgtctagaagaactaaa
aacaacccagttctaattggagaacctggtgttggtaaaactgctgtggtagagggtttg
gctcaaagaattgtgaggggagatgtgcctagtaatcttgccgatgttcgactcgttgcg
ttggatatgggtgcactgattgcaggagcgaaatatagaggagagtttgaagaaagattg
aaagcggttttgaaagaggttgaggaagctgaagggaaagtgattctcttcattgatgaa
atccacttagtacttggcgctggtcgaaccgagggttccatggatgcagccaacctcttt
aaacctatgcttgctaggggtcaacttaggtgcattggtgctactacgttggaagaatat
agaaagtatgttgaaaaagatgctgcatttgagagaaggtttcaacaggtttatgttgct
gagcctagtgtaccagacaccgttagcatccttcgaggattaaaggaaaaatacgagggt
catcacggtgttaggattcaagaccgtgccttggtgattgcagcccaactgtcaagtcga
tatattactggacggcatcttcccgacaaagcaatcgatttggttgatgaagcttgtgca
aatgtgagagttcagcttgatagtcagcctgaagaaattgataatcttgaaaggaaaaga
atgcaactagaagttgagcttcatgcattggagaaagagaaggataaggctagcaaagct
cgactggttgaagtccggaaagaacttgatgatttaagggacaagcttctgccattgatg
atgaaatatcgaaaggagaaagaaagggttgatgagattcgaagattgaagcagaagaga
gaagaactcatgcttgctttacaggaggctgaaaggagatatgatttggcaagagctgct
gatttgagatatggggcaattcaggaagtggaatctgcactagcccagatcgaaggcaca
gcagatgagaacataatgttaaccgaaacagttggaccggagcacattgccgaggctgta
agccgctggactggcatccccgtcacgaggcttggacagaatgagaaggagaggttgatt
gtgcttgcagagaggttgcatcaaagagtggtgggacaaaaccaggctgttgatgctgtt
gcagaagctgttttgaggtcgagagctggattaggaaggccacaacagccaactggctca
ttccttttcttgggtccaaccggtgttggcaagacggagcttgctaagtcactagcggaa
caactctttgatgatgagaatctgctgatcaggattgatatgtccgagtacatggagcaa
cactcagtggctcgacttattggggcaccacctgggtatgttggccacgaggaaggaggg
cagcttacagaggcagtgaggaggaggccttacagtgttgtactctttgatgaagttgag
aaagcacacctctctgttttcaacacactacttcaagtcttggatgatggtcggttaact
gatggccagggccgcactgtggacttcagaaatactgtgatcatcatgacatcaaacctt
ggagcagaacatattctttcaggacttagcaggaaatgtacaatgcaagttgctcgtgat
cgagtcatgcaagaggtaaggcgacattttaaaccagagttgctcaacaggctagatgag
atcgtcgttttcgaccctctatcacatgaccaattgaggaaagttgctagattgcaaatg
aaggatgttgcaagccgccttgctgaaaggggtattgcattggctgtagaagattcagca
ttggactatattcttgctgagagttatgatccagtttatggtgcaagacctattaggaga
tggcttgagaagaaagttgtgactgagctatcaaggatgcttgtgaaggaagaaatcgat
gagaactcgacagtttacatcgatgctccgaatggaagtgagttagtgtatcgggttgag
aagaatggagggttagtcaatgcagagactgggcaaaaagcggatgtattgatccgaatc
ccgaacggaacaagaagaagtgatgctgcacaagcagtgaagaagatgaagattgaggag
atagatgatgaagatgaaatggactcatga
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