KEGG   Gossypium raimondii: 105788559
Entry
105788559         CDS       T04129                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
gra  Gossypium raimondii
Pathway
gra03082  ATP-dependent chromatin remodeling
gra03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105788559
   03083 Polycomb repressive complex
    105788559
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gra03036]
    105788559
Enzymes [BR:gra01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105788559
Chromosome and associated proteins [BR:gra03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     105788559
   HDAC complexes
    Sin3A-HDAC complex
     105788559
    BRAF-HDAC complex
     105788559
    REST complex
     105788559
    SHIP complex
     105788559
    MiDAC complex
     105788559
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     105788559
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105788559
  Chromatin remodeling factors
   NuRD complex
    105788559
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 105788559
NCBI-ProteinID: XP_012470959
UniProt: A0A0D2NZL5
LinkDB
Position
2:complement(36431958..36436620)
AA seq 471 aa
MEDSAGGASLRSGPDGKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRR
MEINRPFPAGPDDIRRFHTEEYVDFLNAVTPDSISDPTYSRHLKRFNVGEDCPVFDGLFG
FCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHR
RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGVGNGKYYALNVPL
NDGMDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFL
RSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEVG
SMENLNAPRDMEKIRNMLLEQLSRLSHAPSVPFQTTPSTIQPPEEAEEDMDERPKPRIWN
GDDYESDPEEDEKPLRRFSNSDVIQLTTDADMREVSQDLKEVKAEEQPPAP
NT seq 1416 nt   +upstreamnt  +downstreamnt
atggaagactctgctggaggcgcatcattacggtcgggtcccgatgggaagaagcggcgt
gtgacatacttctacgagccaacgatcggcgactactattacggtcagggtcacccgatg
aaaccccaccggattcgtatggcacacaatctcatcgtccattattctctccaccgtcgg
atggagattaaccgtcctttccccgccggtcccgacgacatccgtcgctttcacaccgaa
gagtatgtggacttcctcaacgccgtcacccccgattccatctccgaccccacttattct
cgccatttgaagcgtttcaatgtcggagaggattgccccgtgttcgatgggctttttggt
ttctgccaggcctccgctggtggctccattggtgccgccgttaagttgaatagaggggat
gccgacatcgctatcaattgggctggtggattgcatcatgctaagaaaagcgaggcttct
gggttttgctatgttaatgatatcgtgcttgggattctcgagctcctgaaatatcacagg
cgtgtgctgtatgtagatattgatgttcatcacggtgatggtgtagaagaggcgttttac
accactgacagagttatgactgtgtctttccataaatttggggatttcttcccagggact
ggacacatcagggatgttggggtgggtaatggcaaatactatgccttgaatgttcccttg
aatgatgggatggatgatgagagttttcggggtctatttcgccctatcatccaaaaggtc
atggaagtgtatcagccagatgcagttgttcttcaatgtggagcagattcattgtctggt
gacagattgggttgcttcaacttgtctgtgaagggccatgctgattgtcttcgctttctt
agatctttcaatgttcccctaatggtcttgggtggaggagggtatactatccgcaatgtt
gccagatgttggtgctatgagacagctgttgcagttggggttgagcctgataataagctg
ccttataatgaatattatgagtatttcggtccagattatacacttcatgttgaagtgggc
agcatggagaacctgaatgcacctagagatatggagaagataaggaacatgctattagag
cagctttctagattatctcatgcacccagtgtaccttttcaaacaacaccatccaccatc
caaccgcccgaggaggccgaggaggacatggatgaaagaccaaaacctcgcatatggaat
ggggatgattatgagtcagatcctgaagaggatgagaaacctctacgcagattctccaat
tctgatgtaatacaactaacaacagatgctgatatgagggaggtatcacaagatttgaaa
gaagtgaaagcagaagaacaaccaccggcaccttga

DBGET integrated database retrieval system