Gossypium raimondii: 105788623
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Entry
105788623 CDS
T04129
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gra03036
]
105788623
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
105788623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
AAA_18
AAA_14
nSTAND3
AAA_5
Viral_helicase1
ATPase_2
Cytidylate_kin
NACHT
TIP49
ABC_tran
NPHP3_N
AAA_2
AAA_28
AAA_7
RNA_helicase
DUF815
AAA_30
TsaE
AAA_11
RuvB_N
KAP_NTPase
AAA_24
AAA_33
AAA_17
Rad17
SLFN-g3_helicase
nSTAND1
bpMoxR
PduV-EutP
IstB_IS21
AAA_19
NB-ARC
AAA_3
Cytidylate_kin2
Mg_chelatase
ResIII
SRPRB
nSTAND6
NTPase_1
AAA_13
CPT
Motif
Other DBs
NCBI-GeneID:
105788623
NCBI-ProteinID:
XP_012471041
UniProt:
A0A0D2RKP5
LinkDB
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Position
2:complement(37698114..37705035)
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AA seq
457 aa
AA seq
DB search
MSSPMDISVPNLEGVKISDQNGVPLAPPPASPSNVPHEKFQVSVEVCLKPSSTARPDDVQ
KAVEQMLEKRSLSYVDGPIPVPNDDPFLMENVHRICICDTDEWVKNHDILLFWQVKPIVH
VFQLSEEGPCEELTGDGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFT
EKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLIEVNAHSLFSK
WFSESGKLVAKLFQKIQEMIEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNAL
LTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIR
TGIISNIQGSSQYILSDYVTLKEKLNMHEIQEAQTTFHLCKQLAEAAEACEGLSGRTLRK
LPFLAHAELDNPYCCDPNKLLNTMIDTARRERSELPD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccaatggatatttccgttccaaacctcgagggcgtcaagatctccgaccaa
aacggcgtccctttagcaccacccccggcatcgccttctaacgtgcctcatgaaaaattt
caagtttccgttgaagtttgcttaaaaccttcaagcacagctcgccctgacgatgtccaa
aaagccgttgaacaaatgcttgaaaagagaagcctgagctacgttgatggtcccattcct
gtgcctaatgatgatccatttctcatggaaaatgtacacagaatctgtatatgtgataca
gatgaatgggtgaaaaaccatgatattcttttgttctggcaagtgaaacccattgttcat
gtctttcagcttagtgaggagggaccgtgtgaggaattgactggggatggccagttgtcc
agcttcaatgaatggatcctaccagctaaggaatttgacggcatgtgggaaagcttaata
tatgaatctggcctaaagcagcggttattgcgttatgcagccagtgcattgctttttact
gaaaaaggtgttgatcctttccttgtgtcatggaaccgcattattcttttacatggtccc
ccagggactggaaagacatctctatgtaaagcgctggcacaaaagctatccattagattc
agctccagatatccacaatgccaattgattgaagttaatgcacattctttgtttagtaaa
tggttctctgagagtggcaaattggttgcaaagcttttccaaaaaattcaagaaatgata
gaagaagaaaacaatctagtatttgttctaattgatgaagttgaaagtcttgctgctgct
agaaaggctgctttgtctggttctgagccttcagattccattcgggttgtaaacgcgcta
ttaactcagatggataagctgaaatcatctcccaatgttataattttgaccacatccaat
ataactgctgctattgatatcgcttttgttgaccgagctgatatcaaagcatatgtgggc
cctccaactcttcaagctcgttatgaaattttaagatcctgcttgcaggaacttattcga
acaggaataatatcaaatatccagggttcaagccaatacatcctttcagactatgttact
ttgaaagagaaattgaatatgcatgagattcaggaagctcaaacaacatttcatctgtgt
aagcaattagcagaggctgctgaagcatgtgagggattgagtggaagaacattgagaaaa
ctaccatttttggcgcatgcagaacttgataacccgtattgttgtgaccctaacaagttg
ttgaacacaatgatagacacagcccggagggagcgttccgaactgcccgactga
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