Gossypium raimondii: 105788812
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Entry
105788812 CDS
T04129
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
gra
Gossypium raimondii
Pathway
gra00906
Carotenoid biosynthesis
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Module
gra_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
105788812
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gra01006
]
105788812
Enzymes [BR:
gra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
105788812
Prenyltransferases [BR:
gra01006
]
Terpene biosynthesis
Squalene/phytoene synthase
105788812
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
105788812
NCBI-ProteinID:
XP_012471317
UniProt:
A0A0D2LW69
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Position
7:44649451..44651580
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AA seq
418 aa
AA seq
DB search
MSLKLLWFVSSQSNLGFLHHGNRSLPCPNLLFQHRAGKGKNQRWKPHFCSLRTHVPGSEG
LRRSKVKVTVMSTMAATSSAGEIAMSSEEKVYNVVLKQAALVNKQLRSPRGDVVVPGDLS
LLNEAYDRCGEICAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNAPHITPT
ALDRWEARLEDLFNGRPFDMLDAALANTVNKFPVNIQPFKDMIEGMRMDLRKSRYKNFDE
LYLYCYYVAGTVGLMSVPVMGIAPESLASTESVYNAALALGIANQLTNILRDVGEDAQRG
RIYLPQDELAQEGLSDEDIFSGKVTDKWRNFMKKQIKRARMLFHEAEKGVKELNASSRWP
VSASLMLYKQILDEIEANDYNNFTKRAYVSKAKKLIALPVAYVRSLVAPSTISSSHRN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaagttgctttggtttgtatcttcccaatcaaacttggggttccttcatcat
gggaaccggtccttgccatgtcccaatttgttgttccaacacagagcaggtaaaggtaag
aatcagagatggaaaccccatttttgttctttaaggactcatgttcctggttcagaaggg
ttaagaagaagcaaggtgaaggtcactgtgatgtcaaccatggcagccactagctcagca
ggtgaaatagctatgtcatcagaggagaaggtttacaatgtggtgttgaaacaggcagct
ttggttaataagcaattgagatcacctcgtggggatgttgttgtacctggtgatttgagc
ttgttaaatgaagcatatgatcgttgtggtgaaatttgtgccgagtatgcaaaaaccttt
tatttgggaactttgctgatgacccctgaaagacgtagggctatatgggctatctatgtc
tggtgtcggaggaccgatgagctcgttgacggaccaaatgcaccgcatataactcccact
gctttagataggtgggaagcaaggttggaagatctattcaacggtcgtccgtttgatatg
ctcgatgccgctttagccaacacggttaataaatttccagtcaatattcagcctttcaaa
gacatgatagaaggaatgaggatggacttaaggaaatcgagatacaaaaacttcgacgaa
ctttatctctattgctattatgtagccggcactgtcgggttgatgagtgtgcctgtgatg
ggcattgcacctgaatctttagctagcacagagagtgtgtataatgctgcattagcatta
gggatagctaatcaactcactaacatactcagagatgttggagaagatgcacaaagggga
cggatttatctaccacaagatgagttagcacaggaaggactatcagatgaggacattttt
agtggaaaagtaacagataagtggaggaacttcatgaagaaacaaataaagagggccaga
atgttgtttcatgaagctgaaaaaggagttaaagagctaaatgcatcgagtcgatggccg
gtatcggcatcattgatgctatataagcaaatattagatgagatagaggccaatgattat
aacaactttacaaagagagcttatgtaagcaaagcaaagaaattaattgccctccctgtt
gcatatgttagatctctcgtggctccatcaacaattagttcttctcatcggaattaa
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