KEGG   Gossypium raimondii: 105788933
Entry
105788933         CDS       T04129                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
gra  Gossypium raimondii
Pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105788933
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105788933
   03041 Spliceosome [BR:gra03041]
    105788933
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     105788933
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105788933
Spliceosome [BR:gra03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    105788933
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8 DUF7197 DUF2457 CDC45
Other DBs
NCBI-GeneID: 105788933
NCBI-ProteinID: XP_012471481
UniProt: A0A0D2P173
LinkDB
Position
2:complement(43009104..43011833)
AA seq 499 aa
MARKRKQSSSDPEPPKIASEPQPVQEKQQQQPVYISEDPNPNPIVDEEQQILEVEEEIEE
EVEVEEEFEEEEEEEEEEEEEEDDEDDEEAENETLVGSSYAAVLNGAPREAGREDESDDE
PVEKILEPFAKDQLITLIKKAVENHPDFISSVREFADADPAHRKIFVHGLSWDTTAETLT
AEFSKYGEIEECKAVTDRVSGKSKGYAFILFKHRSGARRALKQPQKKIGIRTTSCQLAVQ
GPVPAPPPTGPPVSEYTQRKIFVSNVSPELDPEHLLEFFKQYGEIEEGPMGLDKQTGKPK
GFALFVYRSVESAKKALEEPHKNFQGHVLHCQKAIDGPKQTKGVSGGHHQQYQHHHQGQH
QSQSHYHHAKKGKYSTGGSETGHLMAPSGPAGAGFNHGVAAAGFNPGVAAAAPGLNPALG
QALTALLTSQGAGLGIGNLLGGFTGAAANQGAHAAGYGNQVAGGYGNQMGVQGGYHNPQL
GQGGAGRSQPGGGAPYMGH
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggccagaaagcgaaagcaaagctcctctgacccagaacccccgaaaatagcgtcggaa
cctcaaccggtccaagaaaaacagcagcaacaacctgtatacatatccgaagatccgaac
ccgaacccaatcgtggacgaagaacagcaaatactagaagtggaagaggaaatcgaagaa
gaagtagaagtagaagaggaatttgaagaagaggaggaggaggaggaggaggaggaggag
gaggaagatgacgaggacgacgaagaagcggaaaacgaaaccttagtaggttcatcatac
gcggccgtcttaaatggagcacccagagaagcgggtcgagaagatgaatccgacgacgaa
ccggtcgagaaaattctagaaccgttcgctaaagatcaattgattacccttattaaaaaa
gcggtcgagaatcacccggattttatctcgtcggttcgggagttcgcggatgcggacccg
gcccatcggaagatcttcgtacacgggttgagttgggataccactgccgaaacccttacc
gccgagttttcaaagtacggcgagatcgaagaatgcaaagcggttactgatagggtttcc
gggaaatcgaaagggtacgcttttattctatttaaacataggagtggggcgcggcgggct
ttgaaacagccacagaagaagatcggtattcgaaccacttcttgtcagctggcagtgcaa
ggaccggttcctgctccgcctcccactggtccaccggtttccgagtatacccagaggaag
atttttgttagtaacgtatcgcctgaattggacccggagcatttgcttgagttttttaaa
cagtatggggaaattgaagaaggtccaatggggcttgataagcagacagggaaacctaaa
gggtttgctctttttgtatataggtcggtcgagagtgcaaaaaaagcattagaggagcct
cataagaattttcaaggtcatgttcttcattgccagaaggccattgatgggccaaaacag
actaaaggtgtttctggtgggcatcatcagcagtatcagcatcatcaccaagggcaacat
cagagccagtctcattaccatcatgctaagaaggggaagtattcgactggtgggtcagag
actggtcatttgatggcaccatcagggcctgctggagctgggttcaaccatggtgttgct
gctgctgggtttaaccctggagtggctgctgctgcaccgggtttaaaccctgctctggga
caagctttgactgcgttgctcacttcacagggagctggtttggggatcggtaatctgctt
ggagggtttactggtgcggctgcgaaccagggagcacatgctgccggttatgggaatcag
gttgcaggaggctacggaaaccagatgggggtgcagggtgggtatcataacccacaattg
gggcagggcggtgctggtaggtctcaacctggtggtggtgctccttatatgggccattag

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