Gossypium raimondii: 105789250
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Entry
105789250 CDS
T04129
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105789250
Membrane trafficking [BR:
gra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
105789250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
105789250
NCBI-ProteinID:
XP_012472009
UniProt:
A0A0D2MQ43
LinkDB
All DBs
Position
2:complement(46930538..46937776)
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AA seq
1391 aa
AA seq
DB search
MASNPPFQVEDHTDEDFFDKLVDDDDDDSMGPTVPKFTEGIDSDDTKGFSNLSMGEDSGD
EEVDSHAVKEKDPVDTGPAQANVPVVNEPNDSLGFDNSVVETSDHLLEGELSEAGFNQDL
GENVGSKNSGVKEVGWNSLFADSNENGVHGFGHYSDFFSDLGENPIGVFPSEAGEIAKTS
FVDHNSASTYQQYHDGSHDQVYEASAANNGNEQDLYSIDYWEKMYPGWKYDANSGQWYHV
DGSGGDGSWNTDVKAEASYLQQTVQSFAGTMTTLEHGAMENVADWNQVSQVNNGYPEHMI
FDPQYPGYYYDLIAQQWFALDSYNASVQSTVQDDGQQNQNGFASTVQNSQTDSSSMYGEH
GQGDNYGSLGLGSPGGHHNWSDSYGTYKSQGFNMWQPGTAANSGALSSFDANKQSDTSFG
LNMPVNNNASNFQSSYNSLQEAQSVNSANQVHTEANGVTGLQSFLPSENFNNQFIQTNLN
QNEQVNFSNDFYGSQKSVNVAPQPLQSSQPFPYASNTGRSSAGRPPHALVSFGFGGKLII
MKDGSPLQNSSFGTQDSVGAYISVLNMLEVVNSNTSVSAAAPAACDYFNTLCQQSFPGPL
VGGNVSNKDLSKWIDDRIASCESPNMDYGKGENMRMLLSLLKIACQHYGKLRSPFGSDTL
LKETDTPESAVAKLFASAKRKDASYGALSHCLQLLPSEGQVRATAIEVQNLLVSGRKKEA
LQRAQEGQLWGPALVLASQVGEQFYIDTIKQMALHQLVAGSPLRTLCLLIAGQPADVFST
GSTIDGMDLSQQHAEVRTNLMLDDWEENLAVITANRTKDDELVIIHLGDCLWKERSEITA
AHVCYLVAEANFESYSGSARLCLIGADHWKFPRTYASPEAIQRTELYEYSKVLGNSQFVL
LPFQPYKLIYAHMLAEVGKVSDSLKYCQAVLKSLKTSRVPEVETWKHLVLSLEERIRIHQ
QGGYATNLAPVKLVGKLLNFFDSTAHRVVGGLPPPPTSASNGNSQGNDHFNQQTGPRVSA
SQSTMAMSSLMPSSSMEPINDWEGRGADGKMTMHNRSVSEPDIGRTTRQVDSSKETGPSN
EQGKQSVSPGASRFSRFSFGSQLFQKTFGLVLRPRPDKQAKLGEKNKFYYDEKLKRWVEE
GAEPLAKEPALPPPPTTASFQNGTSDYNLNSALKSESSPPNGSPKFRNPTPIEHASGIPP
IPTSSNQFSARGRMGVRARYVDTFNKGGGGQANLFQSPAVSSVKPAAAANAKFFIPMPIS
TTMSEQSMEAITENAQEENATNNNPSTPTSTSSVNDFCQSPRPLPAVTRPRFPSMDNIPQ
EVFTTNANAYPSPHSRRTVSWSGGNFDDPLSPPSKPEIRPSGEAPGKPPPLFMPGPANGS
FGDEQLHEVEL
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccattccaggtggaggatcacacggatgaagatttttttgataag
ttagtagatgatgatgatgatgacagtatgggtcccactgttcctaaattcacggagggt
attgattccgatgatactaaaggcttttccaatttatcaatgggagaagattccggcgat
gaagaggttgatagtcatgctgtaaaggaaaaagatcctgtggatacaggtccagcacag
gccaatgtacccgtagttaatgagccaaatgattcattggggtttgataatagtgtggtc
gaaacgtctgatcatctcctagaaggagaactgtcggaggctggattcaatcaggattta
ggtgagaatgttggatctaagaattctggggttaaggaagtaggatggaattcacttttt
gctgattctaacgagaatggggtgcatgggttcggtcattattccgattttttcagtgat
ttaggggagaatcccataggggttttcccttctgaagcaggtgaaattgcaaaaacgagt
tttgtagatcataattcagctagtacttaccagcagtatcatgatggcagccatgatcaa
gtttatgaagcttctgctgcaaataatggaaatgagcaagatttgtatagcattgactat
tgggagaaaatgtatccagggtggaagtatgatgcaaattcagggcagtggtatcacgtg
gacggttcaggtggtgatggcagttggaacacagatgtgaaagcggaggcttcttatttg
caacagacggttcagtcttttgcggggactatgacaaccttagagcatggtgccatggag
aatgtggcagattggaatcaggtttcacaagtgaataatggttatccagaacatatgatt
tttgaccctcaataccctggttattactacgatttaattgctcaacaatggtttgcactt
gacagctataatgcctctgttcagtcaactgttcaagatgatggtcagcaaaatcaaaat
ggatttgcttctactgttcagaattctcaaactgatagttctagtatgtatggtgaacat
ggacaaggtgataattatgggtcactaggccttggaagccctggtggacatcataattgg
agtgactcctatggtacttataaaagtcaaggtttcaatatgtggcagcctgggactgct
gccaatagtggggcactttcaagctttgatgcaaacaagcaatcagatacatcttttggt
ttgaatatgcctgtgaacaacaatgcaagtaacttccagtcatcctataattctctgcag
gaagctcagtctgtcaatagtgctaatcaggttcatactgaggccaatggggttactggg
ttgcaaagctttcttcctagtgaaaacttcaacaaccagtttatccagacaaatttaaac
caaaatgagcaagtgaatttctcaaatgatttctatggaagccaaaaatctgttaatgtt
gccccgcagccgcttcagagtagccagccgtttccttatgcttccaacacagggagatcg
tctgctggccgtcctccacatgcacttgttagttttgggtttggtggaaaactcattata
atgaaggatggtagtcctctgcaaaactcatcatttggtacccaggattctgtgggagcc
tatatttctgttctcaatatgttggaagttgtcaattcaaacacaagtgtttctgctgct
gcaccagcagcctgtgattattttaatactctgtgccaacaatccttccctggtccattg
gttggtggaaatgtaagcaataaagacttgagcaaatggattgatgaccgaattgccagc
tgtgaatcccctaacatggactacggaaaaggtgaaaatatgagaatgcttctctcattg
ctcaaaatagcttgtcagcattatggaaaacttcggtctccttttggctctgacactcta
ttgaaggagactgatactccagaatcagcagttgctaaactctttgcatctgcaaagagg
aaggacgcatcttatggtgctcttagccactgcttgcagctattgccttctgaaggacaa
gttcgggcaaccgcaattgaggtgcagaatcttctggtttctggtagaaagaaagaggct
ctacagcgtgcacaagagggtcagttgtggggacctgcacttgttctcgcgtcacaagtt
ggtgaacagttctacattgatactattaagcaaatggcacttcatcagctggtagcaggg
tctcctttacggacattatgcctgctaattgcagggcaaccggcagatgttttttccaca
ggctccacaattgatggcatggatttgtctcaacagcatgcagaggtaaggactaattta
atgcttgatgattgggaagagaatttggccgtaataactgcaaatagaaccaaagatgat
gagcttgtaattatccatcttggagattgcctgtggaaggaaaggagtgagataacggca
gcacacgtctgttatttagttgcggaagcaaactttgagtcatattcaggtagtgctaga
ctttgtcttattggagcagaccactggaagtttccccgaacctatgctagtccagaggct
atccagaggacagagttatatgaatattcaaaggtgctggggaactctcagtttgtcttg
ctaccatttcagccatacaaacttatttatgcgcacatgctggctgaagttggaaaagtt
tcagattcattaaagtactgtcaagccgtattaaaatctctgaaaactagtcgagtgcct
gaggtagaaacttggaaacatttagttttatctcttgaagagaggataagaatccatcaa
caggggggatatgctacgaacttggctccagtaaaattagttggtaagttgctaaacttt
tttgatagcactgcgcatcgagttgtggggggtctaccaccacctcctacatcagcatca
aatggaaattctcaaggtaatgaccatttcaaccaacaaaccgggccaagagtctcagct
agccaatcaacaatggctatgtcatctttgatgccctcatcttcaatggaacctataaat
gattgggagggtaggggggctgatggtaaaatgacaatgcataatagaagtgtttcagaa
ccagacattggcagaacaacaagacaggttgattcatcaaaggaaacaggaccatccaat
gaacaaggcaaacaatcagtctcaccaggggcatctcgcttttctcgttttagttttggc
tcacagcttttccagaaaacttttgggttagtcttaagacctcgccctgataaacaggct
aagctgggtgaaaagaacaaattctactatgatgaaaaacttaagagatgggtggaggaa
ggcgctgaacctctggccaaagaaccagccttgccaccacctccaaccactgcttcattc
cagaatggaacatctgattacaacttgaactctgcattgaagagtgaaagttctccccct
aatggaagcccaaaattccgaaatccaaccccaatagaacatgcttctgggatccctccc
attcctacaagctccaatcaattctcagctcgtggacggatgggtgttcgagcaaggtac
gtggacactttcaacaaaggaggtggtggccaagcgaatttatttcagtcacctgctgtt
tcctccgttaaacctgctgctgccgcaaatgcaaagttctttattcccatgcccatatca
acaacaatgagcgaacaatcaatggaggcaattactgaaaatgcacaagaagagaatgct
actaacaataatcccagcactcccacttccacttctagtgtcaatgacttttgtcaatct
cccagacctctgccggcggtgactaggccaaggttcccaagcatggataacatccctcaa
gaagtctttacgacaaatgccaatgcctatccatcaccacactcacgacgaacagtctcg
tggagtggaggcaactttgatgatccattaagtcctcctagtaaacccgaaataagacct
tcaggagaagcaccgggaaaacctccaccattgttcatgcctggtccagctaatggtagt
tttggagatgaacaactacatgaggtggaactttga
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