Gossypium raimondii: 105789950
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Entry
105789950 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105789950 isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
gra
Gossypium raimondii
Pathway
gra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105789950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gra03036
]
105789950
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
105789950
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
105789950
NCBI-ProteinID:
XP_012472748
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Position
8:139002..144243
Genome browser
AA seq
1339 aa
AA seq
DB search
MMAIEKNNFKVSRFDSEFSSDSRDTTSSTDEDELQRPSSAINSDGAGDDDDEDDDDDEFD
DADSGAGSDDFDLLELGEMGAEFCQVGNSTCSVPFDLYDLPGLEDILSLDVWNECLSDEE
RFSLTKFLPDMDQDTFMWTLNDLLKGNNFHFGSPIKKLFDILKGGLCEPRVALYREGLNF
FQKRRHYHHLRMHQNNMVAKLCQTRDAWLNCRGYSIEERLRVLNIMRSQKILVYEKSEDE
DSESSERGDFGEGLWTKRVKDQKALQKKGHHGVGPTLESVSRGQMVGLEPSEYRKQNPKG
ILKARGSKFPSAKEFGGGVYQGLDIDTEPYGLHGTLPRHKYKSGAANRTRDQMRLDDDGD
PMFGTSIQQDRHAVHDSKSRKSGLLRAGKKYGLLRGEELAGDSFMALPLSSKHDSRAYGR
NRNVNQFPDAKVYTSKPPNMRTPYDFAKTSKYSENHQQFAVGNQIKLMKGRTPQLPLKGS
RFDLSERTELFWQNKNQGEDFSVDSSVRSDDWNIRSRKCKMGPQCPDKASLQQMNDRFLF
SDNRIKSSQEKIRGSNVQNGGPLMAVSKGSRAFLKNEETESDSSEQFDDDDDSNPLMRSK
FDYPSGVMEGSRLSSLKSGLDSRKIKSSKKDTMEDGWPLDGINRISEKSFGENVHVPGVE
SYYFKGKQKSKMHEISPLQNSASRALGKVDRKKVSKLSKTGQLGEKLGDRLKMSSTKAYP
TEKRLKGEVVYDHPMSQRDYLLNYPVDEEDASPVTLPLADENNRRRTGKKGRSIETYDCG
EKREASLLGCKTGKEYVGDVDRRGEDGNLQSNLQKRTDDSLSLKKKGKRKLEVDAVTSDM
EALEPHGAEVQVTDVEMEIKPQKKPFTLITPTVHTGFSFSIIHLLSAVRMGMITPLPEDS
LEVGRPRREQNGKQEGGVNGVLSCENTATDNPDQPVQRSIPSLTVQEIVNRVTVNPGDPC
ILETQEPLQDLVRGVLKIFSSKTAPLGAKGWKALVAYEKSTKSWYWVGPIMHSSIDHETI
EEMTSPEAWGLPHKMLVKLVDSFANWLKNGQETLQQIGSLPAPPLELMQVNLDEKERFRD
LRAQKSLNTIGPSSEEVRAYFRREELLRYSIPDRAFSYTAADGKKSIVAPLRRGGGKPTS
KARDHFMLKRDRPPHVTILCLVRDAASRLPGSIGTRADVCTLIRDSQYIVEEVSDAQVNQ
IVSGALDRLHYERDPCVQFDGERKLWVYLHREREEEDFEDDGTSSTKKWKRQKKDTAEQS
DQGAVIVAFHATGNQLGFDDDKKMETECEDRQNPEDNADDSHASEQGHPITWEPLDANLV
QEDKLLCEENSTNEEFDDN
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgattgagaagaacaactttaaagtttcgcggtttgattcggagttttcttct
gatagtagggataccacttcgtcaactgatgaggatgagcttcaacgtccaagctcagct
attaattctgatggtgctggtgatgatgatgatgaagacgatgatgatgatgaatttgat
gatgctgattcaggagcaggttcagatgactttgatttattggaattaggtgaaatgggg
gctgaattttgccaagttgggaactcgacttgttccgtaccttttgatttatatgatctg
cctgggttggaagatattttgtctcttgatgtctggaatgagtgtttaagtgatgaagag
aggtttagcctgactaagtttttacctgatatggatcaggatacatttatgtggaccttg
aatgaccttcttaagggtaataattttcattttgggagtcctattaagaagttgtttgat
atattgaaaggagggttgtgtgagccaagggttgccctttatcgggagggtttgaatttc
tttcaaaagcggcggcattaccatcatttgaggatgcatcagaataatatggttgctaaa
ctttgtcaaacaagggatgcttggcttaattgtaggggatacagtattgaggagcggctt
cgtgttttgaatattatgagaagtcaaaagattttggtgtatgaaaaatcggaagatgag
gattctgaatcctccgaaagaggtgactttggtgaaggcctgtggaccaaaagggttaag
gaccaaaaagctttgcagaaaaagggtcaccatggggttggtcctactttagaatccgtt
tcgcgagggcagatggtgggtttggaaccatcagagtacaggaagcagaatccaaaaggt
atactgaaggcacgtggatcaaaatttccttctgcaaaggagtttggtggtggtgtttat
caaggtttggatattgatactgagccatatggtttgcatggaacccttcctcgacataaa
tataagtcaggggcggcaaacaggacaagggatcagatgaggttagacgatgatggtgac
ccaatgtttggaactagtattcaacaggaccgacatgctgtgcatgatagcaaatcacgc
aaatctggtttattgagagcagggaagaagtatggccttttaagaggggaagaattagct
ggtgacagtttcatggctttgcctctgtcttcaaagcatgattcgcgagcctatggtagg
aacaggaatgtgaatcaatttcctgatgcaaaagtatatacgtcaaagccaccaaacatg
agaacaccctatgattttgccaaaacgtccaagtattctgaaaatcatcagcaatttgca
gttggaaatcagataaagcttatgaaaggcagaactccacaattgccgctgaaagggagt
cgatttgacttgtcggaacgcaccgaactgttttggcaaaataagaaccaaggggaagat
ttttctgtcgattcttcagttagatctgatgattggaatattaggagcaggaaatgtaaa
atggggccacagtgtcctgataaagcttccttacaacagatgaatgaccgattcttgttt
tctgataatcgaattaaatcatcacaagaaaagatcagagggagcaacgtgcaaaatgga
ggaccattaatggctgtttcaaaaggtagtagagcattccttaaaaatgaagaaacagaa
tctgactcatctgaacagtttgatgacgacgacgatagcaatcctctaatgagaagcaag
tttgattacccaagtggtgtcatggaaggttcacggctgtcttcattgaagtctggcctt
gattctagaaagataaaatcttcaaagaaagatactatggaggatggatggcctcttgat
ggaatcaatcgcatctccgaaaagagctttggggaaaatgtgcacgtgccaggagtagaa
agctactattttaaaggaaaacagaagtctaagatgcatgaaataagtcccttgcagaac
tctgcttctagagctttgggcaaggttgataggaaaaaggtatccaagttgagcaagact
ggccaattaggagagaaacttggtgacagattaaagatgtcctcaacaaaggcctaccct
actgagaaaagactgaaaggtgaagttgtctatgatcatcctatgtctcaacgagattat
ctgcttaattatcctgttgatgaggaggatgcttcacctgtgacactaccattggcagac
gaaaataacaggcgtagaactgggaaaaaaggccggagcattgaaacatatgattgtggt
gaaaaacgtgaagcttcattgcttgggtgcaagacagggaaggagtatgtgggagatgtc
gacagaagaggtgaagatggtaacctgcagtctaaccttcagaagcgaactgatgattcc
ctttccttgaaaaaaaagggaaaacggaaattggaggttgatgctgttacctcagatatg
gaagctttggaaccacatggtgcagaagtgcaagttacagatgttgagatggaaatcaaa
ccacagaaaaagccgtttactctgattacccctacagttcatactggtttctcattttcg
attatacatcttctttctgctgttcgcatgggaatgatcactccgcttccagaagattcc
ttagaggttggcagaccccgcagggagcagaatggaaagcaggaaggtggtgtgaatggt
gttctttcttgtgagaacacagctaccgataatccagatcagcctgtgcaaagaagtata
ccttctcttactgttcaagagattgttaatcgtgtaacagtgaatcccggagatccatgt
attcttgagacacaagagccgcttcaagatttagttcggggagttctgaaaattttctca
tcaaaaacagcacctttgggggcaaaaggttggaaggcacttgttgcctatgaaaagtcg
acaaaaagttggtattgggttggtccaattatgcatagctcaattgatcatgaaacaatt
gaggagatgacgtcacctgaagcctggggtcttcctcacaaaatgcttgtcaagctggtt
gattcttttgcaaattggctaaaaaatggtcaagagactctccaacaaatagggagtctt
cctgcaccaccgcttgaattgatgcaagtaaatttagatgagaaagaaaggttcagagac
ctaagagcacagaaaagccttaataccattggcccaagttccgaagaagtgagagcttat
ttccgtagagaggagcttcttaggtattctattcctgacagggccttctcttacacagct
gctgatggcaaaaaatcaatagttgctcctttgagaaggggtggaggtaaaccaacttca
aaggctcgagatcattttatgctgaaacgtgataggccaccacatgttacaattctttgt
cttgtgagagatgctgcttccagattgcccggaagtattggcacccgtgctgatgtttgt
actttgataagagactctcaatacattgttgaagaagtttctgatgcacaagttaaccag
attgttagtggggccttagaccgtttacattatgaacgtgatccttgtgtacaattcgac
ggagaaaggaaattgtgggtttatttacacagagaaagagaagaagaagactttgaggat
gatggtacttcatctactaagaaatggaagaggcagaaaaaggatactgctgaacaatcc
gatcaaggagctgtaattgtggcttttcatgcaaccgggaatcagttgggatttgatgat
gataaaaagatggagacagagtgtgaggatagacaaaatccggaggataatgctgacgac
agtcatgcatcggaacaaggtcatccaataacatgggagcctcttgacgcaaatcttgtc
caggaagacaaattgctatgtgaagaaaattctacaaacgaagaatttgatgataattga
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