KEGG   Gossypium raimondii: 105789983
Entry
105789983         CDS       T04129                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
gra  Gossypium raimondii
Pathway
gra03020  RNA polymerase
gra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105789983
  09124 Replication and repair
   03420 Nucleotide excision repair
    105789983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gra03021]
    105789983
   03019 Messenger RNA biogenesis [BR:gra03019]
    105789983
   03400 DNA repair and recombination proteins [BR:gra03400]
    105789983
Transcription machinery [BR:gra03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     105789983
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105789983
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105789983
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 105789983
NCBI-ProteinID: XP_012472800
UniProt: A0A0D2QPJ5
LinkDB
Position
8:complement(347275..350503)
AA seq 176 aa
MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAAVTMVNKMGFFAETGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTTA
NT seq 531 nt   +upstreamnt  +downstreamnt
atgttttttcacatagtattagagaggaacatgcaattgcatccacgccacttcggtcgt
aacctacgggaaaacctcgtatccaagctcatgaaagatgtcgagggcacttgcagtggt
agacatggttttgtggtggcaataacgggtatcgaaaacgttgggaaaggtttgattcga
gatgggaccgggtttgtgacattccctgtgaagtatcaatgtgttgttttcagaccattt
aaaggggaaatcttggaagctgctgttactatggtgaacaagatggggttctttgccgaa
accgggcctgttcaaatttttgtttcgaaccatttgattccggatgatatggagttccaa
tccggagatatgccaaattatactacatctgatggatcggttaagattcaaaaggacagt
gaagttcgcttgaagataattggaactcgagtagatgctactgaaatattttgtattgga
accataaaggatgatttcttgggtgtgattaatgatccgacaacagcttaa

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