Gossypium raimondii: 105790054
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Entry
105790054 CDS
T04129
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gra03016
]
105790054
Enzymes [BR:
gra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
105790054
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
105790054
Prokaryotic type
105790054
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
105790054
NCBI-ProteinID:
XP_012472907
UniProt:
A0A0D2PPB1
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Position
7:42586525..42591061
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AA seq
366 aa
AA seq
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MQFPFNSISNKQEMQVSLPIVPSKIPSIFPFHHPIYPPHPPHKSLSFQTQASPFKSLKTS
GYLSTISRAIDEEEEYRKARAAVTRKGIEVEGYFIEGLSIGGHETCVIVPELKSAFDIGR
CPARAIHQNFVFITHAHLDHIGGLPMYVASRGLYNLKPPTVFVPPCIKEDVEKLLDIHRT
MGQVELNLDLVALDVGETYELRNDIVVRPFRTHHVIPSQGYVVYSVRKKLKKQYIHLKGK
QIEKLKKSGVEITDIVLSPEVAFTGDTTAEYMLDPRNADALRAKILITEATFLDDGYSID
HARQHGHTHLSEIIENVQWIRNKAVLLTHFSSRYSIEDIRQAVSKLQSKLSAKVVPLTEG
FKSMHT
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttcccttcaattccatctcaaataaacaagaaatgcaagtctctctccccatt
gtaccctccaaaatcccttcaattttcccattccaccatcccatttatccacctcatcca
ccccacaaaagcctctctttccaaacccaagccagcccctttaaatccctcaaaacctcc
ggctatttatcaaccatcagccgtgctatagatgaagaagaagagtaccgtaaagccaga
gctgctgtcacgagaaagggtattgaagttgaaggctacttcattgaaggactctctatt
ggtggccatgaaacctgtgtcatagtccctgaattgaagtctgcttttgatatcgggagg
tgccctgctcgtgctattcatcagaattttgttttcatcactcatgctcatcttgaccac
attggtgggctgccgatgtatgtggctagccgtggtttgtataacttaaagcctccgacg
gtatttgtacctccatgtattaaagaagatgtggagaagctgttggatattcacaggaca
atgggacaagtggaactaaaccttgatttggtcgcacttgatgttggtgaaacatatgaa
ctacggaatgacattgttgtccgaccatttagaactcaccatgttataccaagccagggt
tatgttgtatactctgttagaaaaaagctgaagaagcagtacattcatctgaaagggaaa
cagatcgagaaattgaagaagtctggtgttgagatcacagacattgtattgtctccggag
gtggcttttacaggagatacaacagcagaatacatgcttgatccacgtaatgcggatgca
ttgagggccaaaattctcataactgaggcaacgttccttgatgatggttatagcattgat
catgcaagacaacacggtcatacacatttatcagagatcattgaaaatgttcagtggatc
aggaacaaagctgtcttgttaactcatttctcttcccgctatagtatagaggacattcga
caagctgtttcaaagttgcagtctaaattatcagcaaaggtcgttcctctaacagagggt
ttcaaatcaatgcacacatag
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