Gossypium raimondii: 105790071
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Entry
105790071 CDS
T04129
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1
KO
K27807
short internodes/stylish family transcription factor
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105790071
Transcription factors [BR:
gra03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
105790071
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Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
105790071
NCBI-ProteinID:
XP_012472932
UniProt:
A0A0D2RRP9
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Position
8:1046940..1049351
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AA seq
433 aa
AA seq
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MVRKDFFFYYKGRKIYFCYFFVVVIVATTRGQLPSDTGGTFADWATSSSTAIRAGPDDLL
SLGFNPNAASPAATAAAPAQWPPSARPINNGLAGPEMGMVGLRDFVVVAPAASFNHHHHH
HHHHTQDPIMVNEQINGPSSAAAAVTALGVGVIPLLTAAPCLPPQNVEDTGKFSGIQLWQ
NQSSSHYLKKPASFLDNSNPSMMAGDGGGMGGGSGGSGSSSGATCQDCGNQAKKDCTHRR
CRTCCKSRGFDCPTHVKSTWVPAARRRERQLMSAAATTAGAGSSGSTSGAKKPRLVTSQT
TTTSHTSTSNTTPPRSFDTSSSHQDVGLKETLPGQVRAPAVFKCVRVTAVEGGEDEYAYQ
AVVKIGGHVFKGFLYDQGVEGRDGFPNISELHLGGGGRNAGSSSSPGLDPSDVYAATGGG
FLGGGLGYGNPIN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaaaagattttttcttttattacaaaggaaggaagatatatttttgttatttt
tttgttgttgtcattgtggctaccacaagagggcagctaccgtcagatacaggaggaacc
tttgcagattgggcgacgtcatcgtccacagcaattcgagctggccccgatgatttatta
tcactcggtttcaatcccaacgccgcttctccggcggcgactgcggcggctccggctcaa
tggcctccttctgcacgtccgatcaacaatggacttgctggtcctgagatggggatggtt
ggtctacgggactttgtcgtcgttgctcctgctgcttcttttaaccatcatcatcatcac
catcatcatcatactcaagatcccatcatggtgaatgaacaaatcaacggtccgagttcc
gccgccgccgctgtcaccgcactaggtgtcggtgttatcccacttcttacagcggctcct
tgtttacctccacaaaatgtggaagacactggtaagttcagtgggatacaactatggcag
aaccaaagttcttcacattatcttaaaaaaccagcttcattccttgataatagtaatccc
tccatgatggccggtgacggcggtggaatgggtggaggtagcggtggttctggttctagt
tcaggggcaacatgtcaagattgtgggaatcaagctaaaaaagattgcacccatagaaga
tgtagaacatgttgtaaaagtcgaggctttgattgccctactcacgttaaaagtacatgg
gtacccgctgctcggagaagagaacgccagctcatgtcggccgccgctacaaccgccgga
gctggctcatcggggtctacttccggtgctaaaaaaccaaggcttgtaacttcacaaacc
accaccacttcacatacatcaacttcaaatactacccctcctcgaagctttgatacaagc
tcgagccaccaagatgttggtttgaaagagacattgccggggcaagtccgtgcgcctgcg
gtgttcaaatgcgtacgagtaacggcagttgagggcggtgaagacgagtacgcatatcaa
gccgtcgttaagatcggtggacatgtgttcaaagggtttctttatgatcaaggagttgaa
ggaagagatgggtttccaaatatatctgaattgcatttaggtggtggtgggagaaatgcc
gggtcgtcttcgtcacctggtctcgatccttccgacgtttatgccgctactggtggtggt
tttctcggtggtggtttgggttatggtaatccaataaactga
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