Gossypium raimondii: 105790144
Help
Entry
105790144 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105790144
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
gra
Gossypium raimondii
Pathway
gra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105790144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105790144
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105790144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
Utp21
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
NBCH_WD40
WD40_like
TAF1C_beta-prop
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_SCAP
Beta-prop_ACSF4
RMC1_N
Tricorn_2nd
WDCP
VID27
VPS8_N
Motif
Other DBs
NCBI-GeneID:
105790144
NCBI-ProteinID:
XP_012473034
UniProt:
A0A0D2P5H5
LinkDB
All DBs
Position
8:complement(1694750..1702982)
Genome browser
AA seq
903 aa
AA seq
DB search
MGIFEPYRAIGYITSGVPFSVQRLGTETFVTVTVGKAFQIYNCSNLKLMLIGPQLPKKIR
ALASYRDFTFAAYGTDIAVFKRAHQVANWSGHSAKVNFLLLFGDHILSVDADGNVFIWSF
KGIEDNPAPIEHIKLDANFTPTCIMHPDTYLNKVLIGSQEGSLQLWNISAKKKLYEFKGW
NSSICSCVSSPALDVTAVGCSDGTIHVHNIRYDKEVVTFKHSARGTVTALSFSTDGQPLL
ASGGSSGVISIWNLEKKRLQSVIREAHESSIISLHFFANEPVLMSSSADNSIKMWIFDTS
DGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQGHISKR
AKKLRMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTEQAYVWRLQNFVIGEHILRPC
PENPTPVKACAISACGNFAVLGTAGGWIERFNLQSGISRGSYVDTPKGSAHDGEVVGVAC
DSTNTLMISAGYHGDIKVWDFKGCYVKSSWEVGCTVVKIVYNRLNGLLATVTDDLVIRLY
DVVALRMVRKFEGHTDRITDLCFSEDGKWLLSSSMDGSLRIWDVVLARQIDAIHVDVSIT
ALSLSPNMDVLATTHVDQNGVYLWVNRSIFSGASNVDSFASGKEVVNVRLPSISSMNGSQ
TEDSDEPVTDNSVSKDASVSPTFIKQIPELVTLSLLPKSQWQGLINLDIIKVRNKPIEPP
KKPEKAPFFLPSVPSLSGEILFTPSEANGDVKGNGVEMNDRKLDMAPSTFLQLLQSSTEI
KNFSAFTDYIKGLSPSALDMELRMLQIIDDENLEDLDGKPEMISIELLLDYFVCEISYKN
NFEFIQAVIRLFLKIHGETIRRHPKLQGKAKKLLEIQSDVWQKIDTMFQRTRCMVTFLSN
SQF
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggggatatttgagccgtacagagcaataggttacataactagcggagttcctttctcc
gttcaacgattgggcaccgaaactttcgtcacggtcaccgtcggcaaagcttttcagatt
tacaattgctcaaacctcaagttgatgcttattggtcctcaactaccgaagaagattcga
gctcttgcttcgtaccgtgatttcacgtttgctgcctatgggactgatattgccgtattt
aaacgagctcaccaggtagcaaattggagcggacacagtgctaaagtcaactttttgctt
ttatttggggaccacattctaagtgtagatgctgatggtaatgttttcatatggtcgttt
aaaggaattgaagacaatcctgctccaattgaacatattaagctagatgccaacttcact
cctacttgtataatgcatccagatacttacttaaacaaggttcttattgggagtcaggag
ggttctttgcagctttggaacattagcgcaaagaaaaaactttatgaattcaagggatgg
aattcgagtatctgcagttgtgtttcatcccctgcactagatgttactgctgttggttgt
tctgatggaacaattcatgttcataatattcgttatgataaagaagttgtaacatttaaa
cattctgcacgaggcactgtcactgccttatctttcagcacagatggacagccccttcta
gcatctggaggttcttctggtgtcataagcatatggaatcttgagaagaaaaggctccaa
tcagtcatacgagaggctcatgagagttcaattatttcacttcacttttttgctaatgag
cctgtgctaatgagctcatcagctgacaactcaattaagatgtggatctttgacacaagt
gatggagatcctcgcctcctgcggtttcgaagtggacacagtgctcctccactttgcatc
aggttctatgccaatggaaggcatatcctgtctgccggccaagatcgcgcttttcgcctt
ttctctgtaatccaggatcagcaaagcagagagctgtctcaaggtcacatatctaagcga
gccaagaaactaagaatgaaggaggaggaactgaaattaaagcctgttatcgcatttgat
tgtgctgaaatcagggaacgagattggtgcaatgtggttacatgccatatggatactgaa
caggcatatgtgtggcgacttcaaaattttgtgattggtgagcatatcctgagaccatgt
cctgaaaatccaactcctgtgaaggcctgtgccatcagcgcttgtggtaattttgcggtt
ctagggacggcagggggttggattgagagattcaatctccaatctggaataagtcgaggt
agttatgtggacacgccaaaaggaagtgctcatgatggagaagtcgttggagttgcatgt
gattctacaaataccttgatgataagtgcagggtatcatggagacattaaggtatgggat
ttcaagggatgttacgtaaaatctagctgggaagttggatgtactgtggttaagattgtt
tacaatcggctcaatggtcttttggccacagtaacagatgatttggttatacgtttgtat
gatgttgtggcattaagaatggttcgtaaatttgaaggccatacagaccgtatcactgat
ttatgtttcagtgaggatggcaaatggctgctatcatccagcatggatgggagtctgaga
atttgggatgttgtcttagcgagacaaattgacgctatacatgttgatgtatctatcaca
gcattgtccttgtcaccaaatatggatgttttagcaactacgcatgttgatcagaatggg
gtttatctgtgggttaaccggtcgatcttctctggagcttcaaatgtggattcttttgca
agcggaaaggaagttgtaaatgtcaggttgccatccatctcatctatgaatggatcccaa
actgaggattccgatgaacctgttacggacaactcagtttcaaaagatgcttctgtttct
ccaaccttcattaagcaaataccggaactagttactctctcactattgccaaaaagccaa
tggcaaggcttgatcaatttagacattataaaggttcgcaacaaaccaattgagcctccg
aagaaacccgagaaggctcctttcttcttgccttcagttccatctctttctggagaaata
ttatttacacctagtgaagctaatggtgatgtaaaaggcaatggcgtggaaatgaatgat
aggaaacttgacatggcaccgtctacttttttgcaacttcttcagtcctccacggagata
aaaaacttttcagcgtttactgattatattaaaggtttatctccttcggctttggacatg
gagcttcggatgcttcagatcatagacgatgagaatttggaagatcttgatgggaaacct
gagatgatttcaattgaactgttattggattattttgtttgtgagatctcctacaagaac
aattttgagttcatacaagctgttatcaggttattcctgaagatccatggtgaaacaata
cgacgccatccgaagttacaaggcaaggcaaagaagctccttgaaatccaatctgacgta
tggcagaaaatcgatacaatgtttcaacgaacaagatgcatggtgactttcctcagtaat
tcacaattttga
DBGET
integrated database retrieval system
