Gossypium raimondii: 105790166
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Entry
105790166 CDS
T04129
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER isoform X3
KO
K21444
poly(rC)-binding protein 3/4
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105790166
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
105790166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_N4BP1_2nd
MOEP19
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
105790166
NCBI-ProteinID:
XP_012473067
UniProt:
A0A0D2QQQ0
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All DBs
Position
8:1924936..1941149
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AA seq
435 aa
AA seq
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MEIADASENGSAKTQAPNNTAIVADPSAVSPSETTANNPAVEKWPGWPGHCVFRLIVPVS
KVGSIIGRKGELIKKMCEETRARIRVLDGAVGTPDRIVLVSGKEAPEAPLSPAMDAAIRV
FKRVSGLPDNDGDAKAAGAAFCSIRLLVASTQAISLIGKQGSLIKSLQESTGASVKVLST
DETPSYVVADERIAELQGEALKVLKALEAVVGHLRKFLVDHTVLPLFEKTHNTVVTQDLQ
AETRAEKSSLLTVSQSGIGIDLPITARRDSLFLDHEKQFESRIPSGISFYGQDPALPTVH
SSSGLLRTAVPIVTQIAQTMQIPFSYAEDIIGIGGVNIAHIRRTSGAVITVQESGGLSDE
ITVEIKGTSSQVQLAQQLIQEFMSNHKDPVMSSGYRDTSYRSSFSQLGSSSALSSQPYGG
YGGSSSVSGYSTFRL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgccgacgcctcggagaacggttcggcaaagacccaggcaccgaacaacacg
gctatagtagccgacccatcagccgtaagcccttcagaaacgaccgctaataacccagca
gtagagaagtggcccggctggccgggtcactgcgtttttcggctcatcgtgccggtttct
aaagtgggcagcataattggccgtaaaggcgagcttatcaagaagatgtgcgaggaaacc
cgggcccgtatccgcgtacttgatggtgctgttggaactcccgatcgaattgtactagta
tctggaaaggaagcaccagaggcgcctctttcgcctgcaatggatgctgctataagagtt
tttaaacgtgtctctggattgccggacaacgatggggatgctaaagcagctggagctgca
ttttgttcgatccggttgttggtagcttctacgcaagcaatcagtttaatcggaaagcaa
ggctccttaattaagtcattacaagagagcaccggtgcatctgtgaaggtgttgtcaaca
gatgaaacaccatcttatgtggtagcagatgagaggattgcggagttgcagggggaagcc
ctgaaggttcttaaagctcttgaagcagtggtggggcacctgaggaaatttttggttgat
cacactgttcttcctctttttgaaaagacccataatacggttgtcactcaagatctccaa
gcagagacaagggctgaaaagtcatctctgcttaccgtttctcaaagtggaatcggaatt
gatcttcctattacagcaaggagagactctttattccttgatcatgaaaaacagttcgag
tcacgaatcccatctggaatttcattctatggacaggatcctgcacttccgacagtacat
tctagttcaggccttcttcgaaccgctgttcctatagttactcagattgctcaaaccatg
caaataccattttcttatgctgaggacattattgggattggaggagttaatattgcacac
attcgtcgcactagtggagccgtcataaccgtgcaagaaagtgggggcctatctgatgaa
ataacggttgaaattaaaggcacctcatctcaggttcagttggctcaacaacttattcaa
gaatttatgagcaatcacaaggatccggttatgagcagcggttacagagacacgagctat
aggtcctcgttttcgcagttaggcagctcatctgcactttcatcccaaccctatggtgga
tatgggggatcttcaagtgtaagtggctactctacttttaggctttaa
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