Gossypium raimondii: 105790183
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Entry
105790183 CDS
T04129
Name
(RefSeq) long chain acyl-CoA synthetase 8
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gra
Gossypium raimondii
Pathway
gra00061
Fatty acid biosynthesis
gra00071
Fatty acid degradation
gra01100
Metabolic pathways
gra01212
Fatty acid metabolism
gra04146
Peroxisome
Module
gra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
105790183
00071 Fatty acid degradation
105790183
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105790183
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gra01004
]
105790183
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105790183
Enzymes [BR:
gra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
105790183
Lipid biosynthesis proteins [BR:
gra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
105790183
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of breast milk
105790183
Exosomal proteins of breast cancer cells
105790183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
105790183
NCBI-ProteinID:
XP_012473109
UniProt:
A0A0D2LWX1
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Position
7:complement(42371567..42377535)
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AA seq
731 aa
AA seq
DB search
MKNTKATTLSQPLTKKFHVDDYLSSFGEKYGTYGIVSAAIAAVIVPILLSSIMRKKKGKK
RGVPVEVGGETGYAVRNARTTELLQCPWEGATTIAELFEQCCKKYSRNHYLGTRKVIKKD
FVTASDGRKFEKLQLGDYEWQTYGEVYQRACHFASGLVNFGHDVDTRIAIFSETRAEWQI
ALQGCLRQNITVVTIYASLGEDALTHSLNETQVTTLICESKQLKKLAAIRPSLETISSII
YFEDNEAANISGVFGSMSSLSVSSFHEVELLGERAPVPPSLPSKDNIAVIMYTSGSTGLP
KGVMITHGNIVALAAAVLTVIPGIGKNDVYLAYLPLAHVLELAAESVMLSAGCAIGYGSP
LTLTDTSSKIMRGTKGDASVLRPTLMAAVPAILDRVRDGVLKKVEEKGGLARKLFDIAYK
RRLQSIEGSWFGAWGLERWLWDVIVFERVHAALGGRLRLMLSGGAPLSANSQRFINICMG
APVCQGYGLTETCAGSAFTEWDDTTIGRVGPPVPCCYLKLVNWEEGGYSISDKPMPRGEV
VVGGHSVTHGYFNNPEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQH
GEYISLGKVEAALTSSKFVDNLMVHADPFHSYCVALIVPSRDVLEKWAVEAGIKYQDFPE
LCGKAETVSEVQKSLSKVGKDAKLDKFEIPAKIKLMAEPWTPESGLVTAALKIKREQIKS
KFKDDLQKLYQ
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaccaaagcgacaactctcagccaacccttgacaaaaaaatttcatgtcgat
gattatttgtcatcatttggggaaaaatatggaacatatgggattgtgagtgctgctatt
gctgctgtgatcgtacccatattgctttcctctatcatgagaaagaaaaaggggaaaaaa
agaggagttccagtcgaagtgggtggtgaaacaggttatgctgtgcgcaatgctcgaacc
actgagttgcttcagtgtccttgggaaggagccactacaatagctgaacttttcgagcaa
tgttgtaagaagtattcacggaatcattatcttggaacaagaaaagtaattaagaaggac
tttgttactgctagtgatggaaggaaattcgagaagctacagcttggggattatgaatgg
caaacttatggagaagtttatcaacgtgcttgtcactttgcgtccggtcttgttaatttt
ggtcatgatgttgatactcgtattgcgatattttctgaaactcgagcagaatggcaaatt
gctttacagggttgccttaggcagaatataacagttgtcactatttatgcttcactaggt
gaagatgccttgacccattccctaaatgagacacaggtaacaaccttgatctgtgaatcc
aagcagttaaaaaagttggctgcaatacgcccaagcctggagacgatctcaagtatcatt
tactttgaagacaatgaagctgccaatatttctggtgtatttggaagtatgagtagcttg
agtgtttcgtcctttcatgaagttgagttgcttggggaaagagcacctgttccgcctagt
ctaccctccaaggacaatatagctgttattatgtatacaagtggcagtacaggtctgcca
aagggagttatgataactcatggaaacattgtagcccttgctgcagcggttttgactgtg
atcccaggaattggaaagaatgatgtatacttggcatatttgcccttagctcatgttttg
gaattggcagctgagtcggtgatgctgagtgcaggttgtgcaattggctatggttcacct
ttgacactaactgatacttctagtaaaatcatgagagggactaagggagatgcttctgta
ttgaggcctactctaatggcagccgttccagctatattagatcgtgtccgggatggagtt
ctgaaaaaggttgaggagaagggaggattagcaaggaaactttttgatattgcttataaa
cgtcgactgcaatctatagaaggaagctggtttggtgcttggggacttgagagatggttg
tgggatgttattgtttttgaaagggtacatgctgcactaggaggtcgcttacgacttatg
ctctctggtggggctcctttatctgccaattcccaacgcttcatcaacatttgcatgggg
gctcccgtatgtcaaggatatggcttgacagaaacatgtgctggaagtgctttcactgag
tgggatgatacaactataggccgagttgggccacccgttccttgttgctaccttaagctt
gtcaattgggaggaaggtgggtattcaatatccgacaaaccaatgcctcgaggagaggtt
gttgttgggggacatagtgtaactcatggctatttcaacaatcctgagaaaaccgatgag
gtttacaaggtcgatgagaggggcatgcgctggttttacaccggggatatcggacaattt
catcctgatggatgtcttgagattatcgataggaaaaaggacattgtcaaacttcaacat
ggagagtatatatctctcggaaaggttgaggcagcattgacgtcaagcaagtttgtcgac
aatttgatggtgcatgctgatcccttccacagctattgtgtggctttaattgttccgtca
cgcgacgttcttgagaagtgggcagtagaagctggcataaagtaccaagatttcccagaa
ctgtgtggcaaagctgaaactgttagtgaagtccaaaaatcactttcaaaggtggggaaa
gatgcaaaactagacaaatttgaaatacctgcaaagattaaactgatggcagaaccatgg
acacctgaatcaggattggtcacagcagcactcaaaataaagagggaacaaataaagtca
aagttcaaagatgatctccaaaagttgtaccagtaa
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