KEGG   Gossypium raimondii: 105790282
Entry
105790282         CDS       T04129                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
gra  Gossypium raimondii
Pathway
gra03018  RNA degradation
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105790282
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105790282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105790282
   03041 Spliceosome [BR:gra03041]
    105790282
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105790282
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105790282
Spliceosome [BR:gra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105790282
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 105790282
NCBI-ProteinID: XP_012473248
UniProt: A0A0D2P698
LinkDB
Position
8:2961562..2964622
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDQDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcaggcaggaaggaaacagtgttggatttggctaagtttgttgacaaaggtgttcag
gtcaaactcaccggtggtagacaagtcacggggaccctaaaaggatacgaccagctactg
aatcttgtcctggatgaagctgtagagtttcttcgagaccaggatgatccgttgaagact
actgatcagactaggcgtcttggcttgatagtttgtaggggcacagcagtcatgctggtg
tcacctactgatggcacagatgagattgccaatcctttcatccagccagatggagcctga

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