Gossypium raimondii: 105790287
Help
Entry
105790287 CDS
T04129
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105790287
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105790287
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105790287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-C3HC4
zf-RING_2
zf-CCCH_3
zf-RING_5
RING_XB3-XBAT31
zf-RING_UBOX
zf-rbx1
zf-C3HC4_2
zf-CCCH_9
zf-ANAPC11
zf-C3HC4_4
IBR_1
Motif
Other DBs
NCBI-GeneID:
105790287
NCBI-ProteinID:
XP_012473253
LinkDB
All DBs
Position
8:complement(2995069..3000617)
Genome browser
AA seq
404 aa
AA seq
DB search
MPKTKGVLCKFFAHGACFKGENCEFSHDWKDPPNNICTYYQKGICSYGSQCRYEHVKASQ
TDLSASSSSTKPRQFGVSGSAPLGPSTSTYCGSVVLPATSGEFPGSNGGFLPPSTNQAWH
LESGQQDLLDDGDVLQPRSANLVELPICSFAAAGNCPRGDNCPHIHGDLCPTCGKHCLHP
FRAEEREEHVKMCEKKQKHLEALKYSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFC
ISCIRNWRSSSPSSGMDVNTALRACPICRKLSYFVIPSVIWYSTPEEKQEIIDSYKAKLR
SIDCKHFNFGNGNCPFGTSCFYKHTVKPGSYAWKYHRPPPRRSNVIDMDSIFDVFEHLIA
EDEMNIFDAEDLENDDISMEMALFLMQLDYDSSDSSSDEENFHY
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaccaagggggttctttgtaagttctttgctcatggagcatgcttcaaaggg
gagaattgtgagttttctcatgattggaaggatccaccaaataatatttgcacatactat
cagaaaggaatctgttcttatggtagtcaatgcagatatgaacatgtgaaggcatctcaa
acggatttatctgcttcttcttcatcgacaaagcctcgtcaatttggggtctcgggttct
gctcctttaggtccttcaacgagtacatattgtggttccgttgtacttccagctacttct
ggcgagtttcctggttctaatggaggcttcctccctccctcaacgaatcaagcatggcat
ttggaatccgggcaacaagatcttttggatgatggtgatgttttgcagcctaggagtgct
aatctagtcgaacttcctatttgctcatttgctgcagctggtaattgcccccgtggagat
aattgtccccatattcatggagacttgtgtcccacctgtggaaaacattgtttacatcct
ttcagagctgaggaaagggaggagcatgtaaaaatgtgcgagaaaaagcaaaagcacctt
gaggcattgaaatatagtcaagaaatagaatgcagtgtgtgcctggatcgtgttctctcg
aagcccacagcagctgaacggaagtttgggttgctctcggaatgtgatcatccgttttgc
atatcctgcattagaaattggcgcagcagttccccgtcctctggaatggatgtcaatact
gcattaagggcttgcccaatctgtcgcaagctatcgtactttgtcattccaagtgtcatt
tggtattcaactccagaagaaaagcaggaaatcatcgatagctacaaggcaaaactgagg
tcaatagattgcaagcacttcaacttcggaaatgggaactgcccttttggtactagttgt
ttctacaagcatacggtcaagccaggctcttatgcatggaaataccacaggccacctcct
cgcagatccaatgttatagatatggactcaatttttgatgtcttcgagcacttaattgca
gaagatgaaatgaatatttttgatgctgaagatttggaaaacgatgatatatctatggag
atggccttatttttaatgcagctagattatgattcaagtgactcctcaagtgatgaggag
aattttcactattaa
DBGET
integrated database retrieval system
