Gossypium raimondii: 105790297
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Entry
105790297 CDS
T04129
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105790297
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105790297
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105790297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-RING_5
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf_RING_Vps8
zf-RING_16
zf-ANAPC11
zf-C2HC5
Prok-RING_4
Stress-antifung
DUF1125
PHD_NSD
FANCL_C
zf_RING_Vps8_fungal
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
105790297
NCBI-ProteinID:
XP_012473273
UniProt:
A0A0D2N7S0
LinkDB
All DBs
Position
7:42288518..42290107
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AA seq
150 aa
AA seq
DB search
MGLSSLPSPSEGVLCILLVNTALSISIVKGIIRSILHVVGVHLPPPSSDYTENLSESFDF
HLNTPESYIEEFRSRTPTIHFGAVLCSCKRPQHDCQVCLTQFEPKSEINHLSCGHLFHKV
CLEKWLDYWNITCPLCRTPLLPEEEASCFW
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctcaagtcttccatctccatcagaaggagtgttatgtatactcttggtaaac
acagctttatctatatctatagttaaaggcataatccgatcgatccttcacgttgtcggt
gtccatctcccaccaccatcatcggattacactgaaaatctctcggaatcattcgatttc
caccttaatactcctgaaagttacatcgaggaattccggagtaggaccccaacaattcat
ttcggtgctgttttatgtagctgcaaacggcctcagcacgactgtcaggtttgtctgact
cagtttgagccaaaatccgagattaaccacttgtcgtgtggccatctctttcacaaggtg
tgtttggaaaaatggttggattattggaatattacatgccctctttgcaggactcccttg
ttgcctgaagaagaagcttcttgcttttggtaa
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