Gossypium raimondii: 105790302
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Entry
105790302 CDS
T04129
Name
(RefSeq) eukaryotic translation initiation factor 4G isoform X1
KO
K03260
translation initiation factor 4G
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105790302
03012 Translation factors [BR:
gra03012
]
105790302
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105790302
mRNA cycle factors
Stress granule specific factors
105790302
Translation factors [BR:
gra03012
]
Eukaryotic type
Initiation factors
eIF-4
105790302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
105790302
NCBI-ProteinID:
XP_012473277
UniProt:
A0A0D2RRI6
LinkDB
All DBs
Position
8:3168612..3185532
Genome browser
AA seq
1875 aa
AA seq
DB search
MSFKQSRSDKSEQQQYRKLGRSASSNQQQRTSSGGYGEGGGGGPAPSSSLSSSSSSSRSF
KKSNNAQGGQPRVNTPAVNSTESSNASAARNIQTGARVQPQLQGASNMPVASGVAKPVGP
PANQRSTQAVPKAPTSQSATLSSDSSFSTHPTKGDASQAFSLQFGSISPGSMNGMQIPAQ
TSSAPPNLDEQKRDQAFHGSSVKSVSNLPTTVPRQQLPRKDSVATGQSNSGEAHPMPMVK
KDVQASAGPAVNQTQKSSHLNIPMASMQMPFHHQPQVPMQFGVTNPHIQSQSPSVSATSI
QMPLYMPIPMENDPQVMQQQLLVPGLSPHPLPLQGMMHQGQGLSYTPPLGGQLAPQLGNL
GMGIAPQYPQQQGGKFSVPRKTTVKITHPLTREELRLNKQTDTYLDSGSSGPRSHPIAPS
QSQPVPSFAPHSINYYSNPYNTNSIFYPPPNTLQLSSSQIAVAPNAQGLRFNYPVGQSLQ
NISYMNSAAGHGSLPANKPVNLKHGTLESPSVELACDVHDVASSASSGITQVTVKPAIVS
AGEKVTDSSLSINLPPVEKVGSLKSSVPSSDGSLSQAQRDLDTCQESSVQQPKCESESLA
SNSLPATAKRVQATNLDEFVSPAPAAMSEESVRVVVSNDSGRDSLTYSNSVKDYQKKPGK
EGHIQPPNQSMSTSYLASHTAEHSMSSDSAVSDTIRAKTALVSSSAAYVLPQPTKKLTSI
NGSSTSSIDLRTDRKREGLTSDSSEVSGTGSNVDCLDMVQHANIDGSSKLDEQLKPEINR
IKDPLKSMELESDQNSALKASSTSDIVPTFVTARPMLDEDVGASIENKRVSDSMDFSSSK
VSESTDLESSHVVITFGSNASAKAIDSNEVTVTKSGASDQQSTLVTTTDLFDSSSKYEGG
GVPVPSSKDKTALDLSRTKSTSAKGRKKRQEFLEKADAAGTTSDRYIAFKSPEEKKETVV
PSASAESNCTGVDLKLVSHESPQVDSTGSEELAQDKAQLDDWEDVADSCAPKLETSNNGE
KAHEGLINIEKDGSGNISKKYSRDFLLKFAEQCTDLPQGFEIASDIAEPLMTPNVNGSHL
VDRDSYPSPGRKMDRQSSGSRLDRRGSGMVDNERWVKLPGSFRPGRDLRLDPSYGAAASF
QPVQGGNFGIVRHPRAQTSLPFVGGILAGPMHPMGLQGGMPRNSPDTDRWQPVANYSQKG
LISSPQTPLQTMHRAARKYEMGKVTDEETLKQRQLKAILNKLTPQNFEKLFEQVKAVNID
NAVTLKGVISQIFDKALMEPTFCEMYANFCYHLAGELPDFSEGNEKITFKRLLLNKCQEE
FERGEREQEEANKVEEVGEAKRSEEEREEKRVKARRRMLGNIRLIGEVYKKKMLTERIMH
ECIKKLLGEYENPDEEDIEALCKLMSTIGEMIDYPKAKVYMDAYFERMAKLSNNVKLSSR
VRFMLKDAIDLRKNKWQQRRKVDGPKKIEEVHRDAAQERQAQASRLAHGPGINPAARRAP
SDFGPRASVLSSPGPQVGSFRGSSTQLRGFRAQDARMDDRLRIETRTLLVPLPQRPVGDD
AIALGPQGGLARGMGFRRPPAMPSTPLADVSPISGDSRRLAAGSNGFSSLPERATYGSRE
EFMPRDMRERFAAPAAYDQLSSREPGMNFSNRDSRNPNRPLAASPARGQTSGFTQNTSPE
RGWSEERLQEMSMATIREFYSARDEKEVALCIKDLNSQSFHPTMIALWVTDSFERKDMER
HLLAKLLVNLARSRDGVLSQDQLVKGFESVLSTLEDVVNDAPKAAEFLGHIFAKIIVENV
VTLNEIGRLIYDGGEEPGRLLETGLAADVLGSTLGVINTEKGETVLNEIRASSSLRLEDF
RPPHSNKSSILEKFI
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaagcaatcaaggtcagataaaagtgagcaacaacagtacagaaaattaggg
cgatccgccagctctaatcagcagcagcggacctcctcaggcggttacggtgagggcggt
ggcggtggtcccgccccttcatcgtctctttcttcgtcttcatcttccagtcgaagtttt
aagaagtctaacaatgcacaaggagggcaacctagggtaaatactccggctgtaaattct
actgagtctagtaatgcttctgctgctcgtaatatacaaactggtgcacgtgtacagccc
caattgcaaggagcatccaatatgccggttgcaagtggtgttgccaagccggttggccca
cctgccaatcagagaagcacccaagctgttccgaaggctccaacttctcaatctgccacc
ttgagttctgacagtagtttttccacacaccccacaaagggagatgcatcccaagcattc
tctttacagtttgggtccataagtcctggttcaatgaacggaatgcagattccagcacaa
actagctcagcacccccaaatttggatgagcagaaacgcgatcaggcattccatggttct
tctgttaaatctgtgtcaaatttgcccactactgttcctaggcagcagctaccgagaaaa
gattcagttgcaactggccaatctaattctggggaggctcaccccatgcccatggtcaaa
aaagatgtacaagcctctgcaggacccgctgtgaaccagacacagaagtcatctcatctt
aatattcccatggcctcaatgcaaatgccatttcatcaccaacctcaggttcccatgcaa
tttggtgtgactaatccacatattcagtctcagtctccgagtgtaagtgctacttcaatc
cagatgccattgtatatgccaataccgatggaaaatgaccctcaggtgatgcagcagcaa
cttttagtcccaggtctttcgcctcacccattgccacttcagggaatgatgcatcagggt
cagggcttgagttacacaccacctttgggtggtcagcttgcaccccaattgggcaacttg
ggaatgggcattgcccctcagtatcctcaacagcaaggagggaagttcagtgttcctcga
aaaactactgtcaagattacacaccctttgactcgcgaagaattaaggcttaataaacaa
acagatacatatttagacagtgggtcatcaggtccaaggtctcatcctattgcgccttct
caatcccaaccagttccatcatttgctcctcattcaatcaactattattccaatccctac
aataccaattctatcttttatccacctccaaatactctgcaattgtctagtagccagata
gcagtagcaccaaatgcccaagggctgagatttaattatcctgttggccagagtcttcaa
aacatttcttatatgaactcagcagctggccatggttcacttccagctaataaacccgta
aatcttaaacatggtactttagaatcaccaagtgtggaactggcatgtgatgttcacgat
gtagcatcctctgcttcatctggcataacacaggttacagtcaagccagcaattgtttct
gctggagaaaaggtgacagattcatctttatcaattaatttgccccctgttgaaaaggtt
ggatcactaaaatcttcagtaccatctagtgacggtagcttatctcaggctcaaagagat
ttggatacttgtcaagagagctctgtacagcagccaaaatgtgaaagtgaatcattagca
tccaattcattgccagctacagcaaaaagagttcaagcaactaacttggatgagttcgta
tctcctgctccagctgctatgtctgaggagtcagttcgggttgttgtcagtaatgacagc
gggagggacagtttgacctactctaactctgtaaaagattatcagaagaagccgggtaag
gaaggacatattcagccaccaaatcagtccatgtcaacatcctacttggcttcccacact
gcagaacacagtatgtcctcagacagtgcagtctctgacactataagggccaaaacagct
ttagtatcatcatcagctgcttatgttttgccacaacctaccaagaagttaacatcaatt
aatggttcttcaacttcttctatagatctgaggacagacaggaagagagaaggcttaacc
tctgattcatctgaagtttctggtactggcagtaatgttgattgcttggacatggttcag
catgctaatatagatggttcttccaagcttgatgagcaactgaaacctgaaattaataga
attaaggatcccttgaaatctatggagcttgaatccgatcagaattctgctttgaaggca
tcatctaccagtgatattgttcctacctttgtaactgcacgtccaatgcttgatgaagac
gttggggctagcattgaaaataagagagtctctgatagtatggatttttcttcctctaaa
gtatccgaatctacagatcttgaaagttcacatgttgtaatcacctttggttccaatgca
tctgcaaaagccatcgatagcaatgaggtcactgttactaaatctggtgcatctgaccag
cagtctactctggtcacaactaccgatctcttcgattcatcatcaaaatatgaaggaggt
ggtgttcctgtacctagttcaaaggacaaaactgcactggatctcagtaggacaaagagt
acttcagctaaagggaggaaaaaaagacaagaatttcttgagaaggctgatgctgccggg
acaacttctgatcgctacatagcttttaaaagtcccgaggaaaagaaagagacagtcgta
ccttcagcaagtgcagagagcaattgcactggggttgatttgaagctggtatctcatgag
tcccctcaggtggattctacaggaagtgaggaacttgcacaggataaggctcaacttgat
gattgggaagatgttgctgacagctgtgcaccaaaattagaaacttcaaataatggcgag
aaggctcatgaagggttaataaatatcgagaaagatggaagtgggaatatatcaaagaag
tattcccgagatttccttcttaagtttgccgagcagtgtactgatcttccacaaggtttt
gagattgcttcagatattgcagagcccttgatgactcccaatgtcaatggctcgcacctt
gttgatcgtgattcatatcctagtcctggaagaaaaatggataggcaatctagtggatct
cgattagatcgacgtggtagtggaatggtggataacgagagatgggtgaaactacctggt
tcttttaggccaggaagggatttgcgtcttgatcctagttatggtgctgctgcaagtttt
caacctgtccagggaggtaactttggcattgtaaggcacccacgagctcaaacatcgctg
ccatttgttggagggatccttgctggaccaatgcaccctatgggtctgcaaggagggatg
ccgagaaatagtcccgatactgacaggtggcagcctgttgctaactattcacagaagggg
ttgatttcttcaccacaaacaccattacagacgatgcacagagctgcaagaaagtatgaa
atgggtaaagtgactgatgaggaaaccttaaagcaaaggcaactaaaagccattttgaac
aaactaactccccaaaactttgagaaactttttgagcaagtaaaagcagtgaacattgac
aatgcagttacactcaaaggtgtcatctcacaaatctttgacaaagctttgatggagcct
actttctgtgaaatgtatgcgaacttctgttatcatctggcaggagagttgcctgatttt
agtgaaggcaatgaaaagattactttcaagagattgctgctgaacaagtgccaggaggaa
tttgaaagaggggagagagagcaagaagaagcaaataaagttgaggaagtgggtgaggct
aaacggtctgaggaggaaagagaggagaagagagtcaaggcacggagacgaatgttgggt
aacattagacttattggagaggtgtacaagaagaaaatgttaactgagagaatcatgcat
gaatgcatcaagaaattacttggtgaatatgagaatcctgatgaagaagatattgaggct
ttgtgcaaattaatgagtacgattggagaaatgatagactatcccaaagcaaaggtgtat
atggatgcctattttgagaggatggctaagttgtcaaacaatgtgaaattatcttctagg
gttaggttcatgttgaaagatgctattgatctgagaaagaataagtggcagcagaggagg
aaagttgacgggcctaaaaagattgaagaagtgcacagagatgccgctcaagagcgacaa
gcacaagccagtaggcttgctcatggtccgggcatcaatcctgctgcaagaagggcaccc
tcggattttggcccacgagcatctgtgttatcttctcctggtcctcaggtaggtagtttc
cgtgggtcatccactcagctccgtggttttcgggctcaggatgctcgcatggatgacagg
ctgcgtattgagactaggactttgttagttcccttgcctcaaagaccagtcggtgatgat
gctattgcgttgggccctcagggtggcctagctagagggatgggttttagacgaccgcca
gcaatgccaagtactcccttagctgatgtttctcctatttctggagattctagaagattg
gctgctggttcgaatggttttagttctctaccagagcgggctacttatggttctagagag
gaattcatgccaagagatatgagagagagatttgcagcgcctgctgcttatgaccagttg
agttcccgggaacctggcatgaatttcagtaatagggattcgaggaacccaaatagacct
cttgcagcatctcctgcacgaggccaaacatcaggcttcactcaaaatacttctccagaa
aggggctggtctgaggagcgactgcaggaaatgtctatggccactattagagaattttac
agtgctagagatgagaaagaagttgctttgtgcattaaagatttgaactctcagagcttc
catccgacaatgattgctctttgggtaacagactctttcgagagaaaagatatggaacgg
catcttttggcaaagctacttgtcaatctggcaaggtcccgtgatggtgtgttgagccaa
gatcaacttgttaaagggtttgaatctgttctcagcacattggaggatgtagtgaatgat
gctccgaaagctgctgaatttcttggtcatatctttgccaaaatcatagtagaaaatgtg
gttaccctgaatgagattggacgtttaatatatgatgggggagaggagccagggcgtcta
ctagaaacagggctggctgctgatgttcttggaagcaccttgggggtaattaacacagag
aaaggagaaactgtcttgaatgaaattcgagcaagttcgagcctgcgattggaggacttt
cgacctccacattctaacaaatcaagtattttagaaaagtttatttaa
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