KEGG   Gossypium raimondii: 105790442
Entry
105790442         CDS       T04129                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
gra  Gossypium raimondii
Pathway
gra03018  RNA degradation
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105790442
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105790442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105790442
   03041 Spliceosome [BR:gra03041]
    105790442
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105790442
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105790442
Spliceosome [BR:gra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105790442
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 105790442
NCBI-ProteinID: XP_012473489
UniProt: A0A0D2MU48
LinkDB
Position
8:complement(4797236..4799969)
AA seq 149 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGRGREDGPGGRQPKGAGRGLDD
GARTTSGGRGRGGSGGKNTGGRGSGRGRG
NT seq 450 nt   +upstreamnt  +downstreamnt
atgcttcctctttctctactaaaaacggcacagggtcatcctatgttggtggaactgaaa
aatggggagacatataatggacatttggtcaattgcgacacttggatgaacatccatctt
cgtgaagttatctgtacttcaaaggatggagacaggttttggagaatgcctgaatgctat
atccgtggaaatacaattaagtatcttcgagttcctgatgaggtaattgataaagttcag
gaagaaacaaagagtcgtgcagataggaagcctcctggtgtaggccgtgggagaggcagg
ggtcgagaagatggtcctggtggaaggcaaccaaaaggagctgggcgtgggctagatgat
ggtgctaggactacaagtggaggccgagggaggggtggttcaggtggaaaaaacactgga
ggcagaggtagtggccggggtcggggttga

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