Gossypium raimondii: 105790451
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Entry
105790451 CDS
T04129
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
gra
Gossypium raimondii
Pathway
gra04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105790451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105790451
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105790451
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_NXF1-5
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
105790451
NCBI-ProteinID:
XP_012473503
UniProt:
A0A0D2QSC9
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Position
8:complement(4953628..4958457)
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AA seq
587 aa
AA seq
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MPKRLASSLSDEVLEHVFSFIQSDKDRNVVSAVCKSWYEIERWCRRKIFVGNCYAVSPKM
VIRRFPQVRSIELKGKPHFADFNFVPDGWGGYVLPWITEMAGAYPWLDEIRLKRMVVTDE
SLELIAKSFKDFKVLVLASCEGFSTDGLAAIAASCKNLRELDLRESEVDDSSVHWLSHFP
ETYTSMVSLNISCLGSGEVSFSALERLVSRCPNLRSLKLNRAVPLDKTANILRLAPQLVE
FSTCTYSAELRSDVFSNLAGAFSNCKELRSLSGFWDVVPDYLPAIYSVCSRLTSLNLSYA
TIQSPDLIKLVSHCPSLQRLLVLDYIEDSGLEALASNCKDLQELRVFPSDPFDAEPNASL
TEQGLVAVSLGCPKLQSVLYFCRRMSNAALVTIAQNRPNLTRFRLCIIEPNTADYLTGEP
FDVGFGAIVEHCKDLIRLSLSGLLTDCVFEYIGKYAKKLEMLSVAFAGDSDLGLHHVLSG
CESLRKLEIRDCPFGDKALLTNAAKLETMRSLWMSSCSVSFEACKLLSQKMPRLNVEVID
ERGPPDSRPENYTVDKLYIYRSVAGPRFDMPPFVWTKDEDLALRLSP
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagagattagcgtcttcgctctcagatgaggtgctggagcatgtattctcgttc
atacaatcggataaggatcggaacgtggtatcggcagtgtgtaaatcgtggtacgagatc
gagcggtggtgtcggaggaagatattcgtcgggaactgttatgctgtgagccctaagatg
gtgatcagacggttcccgcaagttagatccattgagttgaaagggaaaccgcacttcgct
gacttcaatttcgtaccggacggctggggcggttacgttttgccatggattacggagatg
gctggcgcttacccttggctcgacgagattcggcttaaacggatggtcgtcacggatgaa
agcttggagcttattgctaagtcatttaaggatttcaaagtattggtgcttgcttcttgt
gaagggttttcaactgatggacttgctgccattgctgctagttgcaagaacctgagagag
ctggacttgcgagaaagtgaagtggatgattcaagtgtgcattggctcagccattttcct
gagacatacacatccatggtgtctcttaacatttcctgtttaggatctggtgaagttagt
ttctcggctttggagcgcctggtcagtagatgtccgaacctcaggtcccttaaactcaac
cgcgctgttccccttgataagactgccaacatattacgacttgcaccgcagctggttgaa
ttcagcacttgcacctattcggctgagctacgttcagatgtcttctcaaacttggctgga
gctttttctaattgcaaggaactaaggagtttgtctgggttttgggatgtggttccggat
taccttccggctatttactctgtctgctctagattaacgtcactgaacttgagttacgca
actatacaaagccctgatctcatcaagcttgtaagccactgtccgagtttgcagcgccta
ttggtacttgattatattgaagacagtggccttgaagcacttgcatctaattgcaaggac
ctgcaggaattacgggtttttccatctgacccgtttgatgccgaaccaaatgcatccttg
acagaacagggccttgttgctgtttctttgggttgtcctaagttacaatcagttttgtac
ttctgccgcagaatgtctaatgcagctctagtcacaattgctcagaaccgtccaaacttg
acccggtttcgtctttgtataattgagccaaatacagctgattacctgactggagagcca
tttgatgttggttttggagccattgttgagcattgcaaggatctcatacggctttccctc
tctggtctcctcacagattgcgtgtttgaatatattggaaaatatgcaaaaaagctggaa
atgctatccgtggcttttgcaggagatagtgatttgggactccatcacgtgctttcaggg
tgtgaaagcctacggaaactagaaattagggactgccccttcggagacaaggctcttttg
accaatgctgcaaagctggagacaatgcgatccctttggatgtcttcctgctccgtgagt
ttcgaagcttgtaagctgctaagtcagaagatgcccaggctgaatgttgaagttatagat
gagaggggacctcctgattcaagacccgagaactacacggtcgataagctctatatctac
cgatctgtggctgggccaaggtttgacatgcctccttttgtttggacgaaggatgaagat
ttggctttgaggctttctccatag
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