Gossypium raimondii: 105790527
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Entry
105790527 CDS
T04129
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105790527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105790527
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105790527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
105790527
NCBI-ProteinID:
XP_012473627
UniProt:
A0A0D2RUA8
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Position
8:6064456..6068170
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AA seq
479 aa
AA seq
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MSESGSKLFIGGISWGTDEDRLKEYFSSFGEVVEAVIMKDRTTGRARGFGFVVFADPAVA
ERVIKEKHNIDGRMVEAKKAVPRDDQNIMSRSTSSIHGSPSPGPTRKIFVGGLTSTVTES
DFKKYFDQFGNIIDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKKFHELNGKMVEVKR
AVPRELSPGPSRSPLGGYNYGLNRVNNFLNGYTLGYAPSSVGGYGLGMDGKFSAVAGGRS
GFSPFGAGYGISMNFEPGLNLNFGNGANFSGNMSYGQGLNPYYIGNTNRLDSPIGHDRSS
GGSTSFFSSATRNLWGGNGGLNYNTNAASSGAYMGSGSGSLRGNALGNNGTNWGSSAISG
QGGRDNISGNSVNFGNGNGDNNFGLGTAGYERNIGTNVVPASSYTASNGGYDISFANLPA
SASIYGDTTWQSSTSVRDSSGTFGYGLDSATSDVTRKSSPGFVGGYNVNKRQANRGIAT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagagtggtagtaaactttttattggtggaatatcttggggcaccgatgaagac
cgtctcaaggagtatttcagtagttttggtgaagtagtagaggcagtgatcatgaaggac
cggaccacggggcgtgctcgtggtttcggtttcgttgtttttgctgaccccgctgttgct
gagagagttatcaaggagaaacacaatattgatggcaggatggtcgaggcaaaaaaggca
gttcctagggatgaccagaatattatgagtagaagcactagtagcatccatggttcacct
agtccaggtcccacaagaaagatttttgtaggaggcttaacctcgacagtcacggagagt
gactttaagaagtattttgatcagtttgggaatatcatagacgttgtggtaatgtatgac
cacaacacccaaagaccgaggggtttcggattcatcacttatgattcagaagaggcagtt
gacaaagtgttattaaaaaaattccatgaactgaatggtaaaatggttgaggttaaaaga
gcagttccccgagagttatcacctggtcctagtcgcagccccttaggtggatataactat
ggtctgaatagggtcaacaactttcttaatggctacactctgggatatgctccaagcagt
gttggtggctatggacttgggatggatggtaaattcagcgcggttgctggtggtcgaagt
gggttttctccttttggtgctggttatggaataagcatgaactttgagccagggttgaac
ctgaattttggaaatggtgcaaattttagtggtaacatgagctatggacagggattgaac
ccgtactatattggtaatacaaatagacttgatagtcctattgggcatgatagaagtagt
ggaggtagtacttcttttttcagctcagcgactcggaatctttgggggggaaatggggga
cttaattacaacacaaatgctgctagttccggtgcatacatgggatctggaagtgggagt
ttaagaggaaatgccttgggaaacaatggaactaattggggttcttctgccatttccggt
caaggtggaagggataacatttctggcaatagtgtgaattttggcaatggaaatggtgat
aacaactttgggttaggaacagcagggtatgagagaaacattgggaccaatgtggtacca
gcatcatcatatacagcatcgaatggtggttatgatatatcctttgcaaaccttcctgca
agtgcttccatttatggggataccacttggcaatcatcaacatctgtgcgagacagttct
ggtactttcggctatggacttgatagtgccacttctgatgttacgcgtaaaagttctcct
ggttttgttggtggttataatgttaataagagacaagcaaatagaggaattgcaacctag
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