Gossypium raimondii: 105790579
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Entry
105790579 CDS
T04129
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
gra
Gossypium raimondii
Pathway
gra03020
RNA polymerase
gra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105790579
09124 Replication and repair
03420 Nucleotide excision repair
105790579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105790579
03400 DNA repair and recombination proteins [BR:
gra03400
]
105790579
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105790579
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105790579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
105790579
NCBI-ProteinID:
XP_012473705
UniProt:
A0A0D2QT10
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All DBs
Position
8:6835274..6836891
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AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAATFTIEREDHTIGNILRTQLHGDENVLFAG
YKLPHPLQYKILVRIHTTSQSSPMQAYNQAINDLDKELDHLKSAFEVEVEKHSRDF
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccccgaccgttacgagagattcgtcgtccccgaggggaccaaaaaggtttct
tacgagagagacaccaaaataataaatgcggccaccttcacaatcgagagagaagaccac
accatcggcaacatcctccgaacgcaattgcatggagatgagaacgttttgtttgctggc
tacaagcttcctcaccctctgcagtacaaaatccttgttaggatccacacaaccagtcag
tcttctccaatgcaagcatataatcaggctataaacgatctggataaggaacttgatcat
ctgaagagtgcatttgaggttgaggtagaaaagcattcaagggacttctaa
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