Gossypium raimondii: 105790593
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Entry
105790593 CDS
T04129
Name
(RefSeq) structure-specific endonuclease subunit slx1 isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
gra
Gossypium raimondii
Pathway
gra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105790593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gra03400
]
105790593
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105790593
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
Motif
Other DBs
NCBI-GeneID:
105790593
NCBI-ProteinID:
XP_012473741
UniProt:
A0A0D2QT32
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Position
8:complement(7066306..7067557)
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AA seq
170 aa
AA seq
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MRLLTSTFRSVKHPIPIPIPIPNPKPNIVKPSLPSESSAVAKSKSELKAWCVYLILSTNP
PIKTYVGVTNNFSRRLKQHNGELSGGAKASRAGRPWVCACIVRGFNDQSEACEFEFKWKM
VSRKLPRKKKNKEADDCSLTLLQHRQTALNKVKGMLDCSHLEIEWQMSTS
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgctcacatcaacattccgatctgtgaaacacccaattccaattccaattcca
atcccaaaccctaaacccaatatcgtaaaaccatcgttgccgtcagaatcgagtgccgtt
gcaaaatcaaaatcagaactaaaagcctggtgcgtttacctaattctttccaccaatccc
cccattaaaacctacgttggtgtcaccaacaatttctctcgccgtttgaagcaacataat
ggcgaacttagcggtggcgcaaaagcatctcgtgctggaaggccatgggtctgcgcctgt
atagttcggggtttcaatgaccaaagtgaagcttgtgagtttgaattcaaatggaaaatg
gtctcaagaaaactgccgcgcaaaaagaagaataaggaagctgatgattgctccctaacg
ttattacaacacaggcaaacagctttgaataaggttaaaggtatgttggattgcagtcac
ttagaaattgaatggcaaatgagtacttcctaa
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