Gossypium raimondii: 105790817
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Entry
105790817 CDS
T04129
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105790817
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105790817
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
90S particles
Helicases
105790817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
105790817
NCBI-ProteinID:
XP_012474048
UniProt:
A0A0D2R1F0
LinkDB
All DBs
Position
8:11918817..11924080
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AA seq
498 aa
AA seq
DB search
MEQKDSPTLVDKSFPLFSKPRRAKPSEAPKPSQNPIPQTPQLEKFSSSSAAADATSISAF
SDLGLAEWAIQTCKELGMRKPTPVQTHCIPKILAGCDVLGIAQTGSGKTAAFALPILNRL
AEDPYGVFALVITPTRELAFQLAEQFRALGSCLHLRCSVVVGGMDMITQAKALVSRPHVV
VATPGRVKVLLEENPDIPKVFQGTKFLVLDEADRVLDVGFEEELRVIFQCLPKTRQTLLF
SATMTSNLQTLLELSANKAYFYEAYEGFRTVETLKQQYVFIPKTVKDAYLVHILSKMEDM
NIRSAMIFASRCRDCHLLSLLLEELEVEAAALHSLKSQALRLSAVQHFKSGRVSILLATD
VASRGLDIPTVDLVINYDLPRYPRDYVHRVGRTARAGRGGLAVSFVTENDVDLVHEIEAE
LGKQLEKFECKENEVLSDFTKVLKAKRVATMKMMDDGFEEKVKERKKQKLKTLAEKGLLK
KRSKKRKREKASAKPSDK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaaagattctccaactttagttgacaaaagctttcctcttttctctaaaccc
cgtagagccaaaccaagtgaagcccctaagccctcccaaaaccctattccccaaactccc
caattggaaaaattttcctcctcgtccgccgctgctgatgccacctcaatttctgctttc
tccgacctgggcctagccgaatgggccatccaaacatgcaaagaactcggaatgcgaaaa
ccaacgccggttcaaacccactgcatacctaaaatacttgctggttgtgacgtgttgggg
atagctcagacgggaagtggcaaaacagcggcgtttgctctaccaatattgaaccgttta
gcggaggatccttatggggtttttgcgctggtgattactccgacgagggagcttgctttt
cagttggcagagcagtttagagcattggggtcttgtttgcatttgaggtgttcggtggtg
gtgggtggaatggatatgattacgcaggcgaaagccttggtttcaaggccgcatgtggtt
gtggccacacctggaagagtcaaagttttgcttgaagagaatcctgatattcctaaagtc
tttcaaggaactaagtttttagttttggacgaagcagatcgagttttggatgttggcttt
gaggaggaactaagagtgattttccaatgcttgccaaaaactcgacaaactttgttattt
tctgcaacaatgaccagtaacctgcaaacactgttagagctttctgccaacaaggcctac
ttctatgaggcttatgaaggcttcaggacagttgaaacacttaagcagcagtatgttttc
atcccaaagactgtgaaggatgcttatcttgttcacattttgtctaaaatggaagatatg
aatatccgctcagccatgatattcgcctcaagatgcagagattgtcatcttttaagttta
ttattagaagaacttgaagtggaagctgcagctctgcattcattaaaatcacaggcacta
aggctttcagcagtgcagcattttaaatctggaagagtttctatactgctggctactgat
gttgctagtcgtggtttagacattcctactgttgatcttgtcattaattatgaccttcca
aggtatcctagggattatgttcatcgtgtgggacgaactgcaagggctggtagaggagga
ttggctgtgagctttgttactgagaatgatgtggatcttgttcatgaaatagaagcggaa
cttggaaaacaattggaaaaatttgaatgcaaagagaatgaagtcctgtctgacttcaca
aaggtattgaaggctaaacgtgttgccacgatgaaaatgatggacgatgggtttgaggag
aaagtgaaagaacgtaaaaagcagaaactcaagacactagcagagaaaggattattgaag
aaaaggagtaagaagagaaagcgtgaaaaggctagtgctaaacctagtgataagtga
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