Gossypium raimondii: 105791045
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Entry
105791045 CDS
T04129
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
gra
Gossypium raimondii
Pathway
gra00531
Glycosaminoglycan degradation
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
105791045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gra00536
]
105791045
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
105791045
Glycosaminoglycan binding proteins [BR:
gra00536
]
Heparan sulfate / Heparin
Enzymes
105791045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
105791045
NCBI-ProteinID:
XP_012474375
UniProt:
A0A0D2RX24
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Position
8:complement(22611513..22614289)
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AA seq
546 aa
AA seq
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MGFCFWVCFISLLNFYSLSFVSSQADASAEGTVFIDGKAPIGRIDDDFICATLDWWPPEK
CDYGTCSWGLAGLLNLDLNKNLFLNAVKAFSPLKIRLGGTLQDKVIYDSDDNQLPCTSFV
KNTSEMFGFTQGCLPMNRWDDLNSFFQKAGAKVIFGLNALAGRTIASDGSAVGAWNYTNA
ESFMQYTVDKNYTIHGWELGNELCGSGVGTRVSADQYAADTAALQSIVQKIYQNVDLKPL
IITPGGFYDSDWFTEYIDKTNKSLDVVTHHIYNLGPGVDDHLVEKILDPSILEGVSGTFS
GLHNIIKNSTTSAAAWVGEAGGAYNSGHNLVTNAFVFSFWYLDQLGMASKYDTKTYCRQS
LVGGNYGLLNTTNFEPNPDYYSALLWHRLMGRNVLSTSFTGTDKIRSYTHCAKQSKGITL
LLINLNNSTTVQAKLAFNSTMSLRHKHRSRISHNKHRIHKTTIIKLPQGIDGKIRREEYH
LTAKDGNLQSQSMLLNGNILSVSSSGIIPHLEPLHVKSAKPIMVAPLSIVFTHMPDVTVP
ACKVQP
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttgtttctgggtttgttttattagtttgttaaacttctacagcttgagtttt
gtaagttcacaagctgatgcaagtgctgaagggactgttttcattgatggaaaagctccg
attggtagaatagatgatgatttcatttgtgctactttggattggtggcctcctgagaaa
tgtgattatgggacatgcagttggggccttgctgggcttctcaatctggatcttaataaa
aacttattcttgaatgccgttaaagctttttcaccattgaagattaggttgggcggcaca
ttacaagacaaagtcatatatgactctgatgacaatcaactaccctgcacttcatttgtc
aaaaacacttctgagatgtttggttttacacaaggatgtttgccaatgaatagatgggat
gaccttaattccttctttcaaaaagcaggagctaaggttatttttggattaaatgcactt
gctggtcgaactatagcctctgatggttcagccgtaggtgcttggaactacaccaatgcc
gaatcttttatgcaatacactgttgacaagaactataccattcacggttgggagttagga
aatgaattgtgcggaagcggggttggaactcgggtctctgcagaccagtatgcggctgac
acagcagctctgcaaagtatagtgcagaagatataccagaatgttgatttgaagccgtta
attatcacaccgggagggttctatgactcggattggttcacggaatacattgataagaca
aacaagtccctcgatgttgtcactcaccacatatacaaccttggaccaggagttgatgac
catcttgttgaaaagattctcgatccatccattcttgagggcgtgtccggaacattcagt
ggccttcataacatcatcaagaattctacaacttcagcagctgcctgggtgggtgaggct
ggaggagcttacaacagtggccataatcttgtcacaaatgcatttgtgttcagtttctgg
tatttagatcaactcggcatggcatccaagtatgatacgaaaacgtattgcagacagtca
ctggttggtggaaattatggtttactaaacaccaccaactttgaaccaaatccagactac
tacagtgcacttctttggcaccggctaatgggaagaaatgttctttcgacaagcttcacc
gggacagacaagatccgctcctacactcactgtgcaaaacaatcaaaaggcatcacacta
cttttgatcaacctcaacaatagcactaccgtccaggcaaaactcgcattcaatagtaca
atgagcttgcgacacaagcaccggtctcggatttcacacaataagcatagaattcataaa
acgacaattatcaagctgcctcaaggcattgatggtaaaataagaagagaggaataccat
ctaacagcaaaagatgggaatttacagagtcaaagcatgctacttaatggaaacatttta
agtgtaagttcatctgggatcatacctcatctggagcctttacatgtaaaatcagcaaag
ccaataatggttgctcctttatccattgtgttcactcacatgcctgatgttactgtccct
gcttgcaaggtacagccctag
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