Gossypium raimondii: 105791085
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Entry
105791085 CDS
T04129
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
gra
Gossypium raimondii
Pathway
gra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105791085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gra02000
]
105791085
Transporters [BR:
gra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
105791085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_22
AAA_29
AAA_16
AAA_5
Zeta_toxin
RsgA_GTPase
AAA_15
AAA_30
AAA_25
AAA_28
SKA2
DUF87
Motif
Other DBs
NCBI-GeneID:
105791085
NCBI-ProteinID:
XP_012474436
UniProt:
A0A0D2MWS6
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All DBs
Position
8:25631508..25637462
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AA seq
718 aa
AA seq
DB search
MSMATASASVTSPLLQKISLTGFSTRTRHASKLKLSLHQSCTFAPFSLISPTKSSRLKNI
SSLESRAYVTGPPIVSESDPRINGLETNTVGAEPPKLISWRLLLSLLVQHKLRISVSVLA
LVGGTTCTLSMPIFSGRFFEVLIGARKEPLWKLLSKVGLLYSLEPIFTVIFVVNMNTLWE
TVMSTLRAQIFRRVLIQKAEFFDRYKVGELSGLLTSDLGSLKDVVSENISRDRGFRALSE
VVGTICILFALSPQLAPILGLLMLFVSVSVAIYKRSTVPVFKAHGMAQASMSDCVTETFS
AIRTVRSFGGEKRQMLMFGSQVLAYQRSGMKLGTFKSINESLTRVAVYISLLALYCLGGS
KVKAGELSVGTVASFIGYTFTLTFAVQGLVNTFGDLRGTFAAVERINSVISGAEIDEALA
YGLEKDIQKKEDDENIKLFISNGAFGKSQQLDSHYMSALKSTSDVGRLAWSGGVALEDVH
FSYPLRPDVEILNGLNLTLKCGTVTALVGSSGSGKSTIVQLLARFYEPTRGRITVSGEDV
RTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDDTVSKDDIIKAAKAANAHEFIISL
PQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNHL
MEGRTTLVIAHRLSTVQNAHQIALCSNGQITELGSHLELLARKGQYASLVDTQRLAFE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggccactgcctccgcctctgtaacctcacctctccttcaaaaaatcagcttg
acgggcttctccactaggacccgacacgcgagcaaactcaaactcagtttgcaccaatca
tgtactttcgcgccattttcactcatttcaccgacaaaatcctcaagattgaagaacatc
tcgagtttagaatcccgcgcttacgttaccggtcctccgatagtgagcgagtccgaccca
aggataaacggtttggagactaacaccgttggagctgagccaccgaaattgataagctgg
aggcttctattgagtcttcttgtccaacataaactcagaatcagtgtttcggtcttggct
ctggttggcggcaccacctgtactctttcaatgcctatattttctggacgattcttcgaa
gtgctcataggcgccagaaaggagccgttatggaagctgcttagcaaagtggggctttta
tactcattggagccgattttcacagttatatttgtggtaaatatgaatactttatgggag
acagttatgtcaacacttcgagctcagatttttagaagagttctgattcaaaaggccgag
ttttttgatcgatacaaggttggtgagctcagtggtttgctgacatctgatttgggatct
ttaaaagatgttgtcagtgagaacatttcaagggatcgtggattcagggcactttctgag
gttgttgggacgatttgcatactgtttgctctgtctcctcaactagccccaattctaggc
cttttgatgctttttgtgtccgtttcggttgctatatacaagcgatcaactgtacctgta
tttaaagctcatggaatggcccaagcttctatgtccgactgtgtaacagaaacgttttct
gcaattcgaactgtaagatcttttggtggggaaaaacgtcaaatgttaatgtttggtagc
caggttcttgcatatcagagaagtggtatgaagcttggcactttcaaatccataaatgaa
tctttgactagggttgctgtttatatttctttactggccttatactgccttggaggaagc
aaagtgaaggcgggtgaactgtctgttggaaccgtggcttcattcatcggatacactttc
actttaacctttgccgtgcaagggctggttaatacatttggagaccttcgaggaactttt
gctgctgttgagaggattaactctgttatatctggagcagaaatagatgaagcacttgct
tatggtctggaaaaagatatccagaagaaagaagatgatgaaaatatcaaattgttcatc
tccaatggtgcttttgggaaaagtcaacaattagattcacattacatgtcagcactgaaa
tcaacaagtgatgtgggaagattagcttggtcaggcggtgttgctctggaagatgtacac
ttttcttatcctttaaggcccgatgtggaaattcttaatggtcttaatttgactctaaaa
tgtggaactgtgactgccctagtgggttcaagtggttctggcaaaagcacaatagtacaa
ctattggcacgcttttatgagccaaccagaggtcgtataactgtttctggagaggatgtt
cggacatttgacaagagtgaatgggcccgagttgtttcaatagtgaatcaagaacctgtt
ctcttttctgtctctgttggagaaaatattgcatatgggcttccagatgatactgtatcc
aaggacgacattattaaggctgccaaagctgcaaatgctcacgaatttataatttctctt
ccacagggctatgacacactggttggtgagcgtggaggcttgctgagtggagggcagagg
cagagaattgcaatagcgagagctcttctcaagaatgctccaatcctgatcctcgatgag
gcaacaagtgctttggatgccgttagtgagcgcctggtacaggatgctttgaatcatcta
atggaaggcagaacaacattagtgattgctcatagattaagcacagttcagaatgcccat
caaattgctctttgctcaaatggccagataacagaacttgggtcccatttggaattgctt
gctaggaaggggcaatatgcttctttagttgacacccaaaggctggcgtttgaataa
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