Gossypium raimondii: 105791116
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Entry
105791116 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Pathway
gra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105791116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105791116
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105791116
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
105791116
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
DUF7567
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
105791116
NCBI-ProteinID:
XP_012474485
UniProt:
A0A0D2MWW3
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Position
8:27170545..27173211
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AA seq
339 aa
AA seq
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MEFDNIECVSTTDGINEDEIHHHNLQHPHPHHAHHQFSSSKPHNATNTTNNGNTTTNNIV
GPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTICSTCKTRVHHRCPTCRQELGDIR
CLALEKVAESLEMPCKYYNLGCPEIFPYYSKLKHEAMCNYRPYNCPYAGSECSVVGDIPF
LVGHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA
PVYMAFLRFMGDETEARNYSYSLEVGANGRKLIFEGTPRSIRDSHRKVRDSHDGLIIQRN
MALFFSGGDRKELKLRVTGRVWKEQQNPDTGVCIPNLCS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgataacattgagtgtgtgtcaactacagatggaatcaatgaggatgagatc
catcaccataacctgcaacatcctcaccctcatcatgctcaccaccaattttcatcgtcc
aagcctcacaatgccaccaacaccaccaataatgggaataccaccaccaacaacattgtg
ggtcctacggccatcgctcctgctaccagcgtccatgaattgttagaatgccctgtttgt
accaattctatgtacccaccaatccatcagtgccacaatggccatacaatttgttctacc
tgtaaaacaagagtacaccatcggtgccccacttgtagacaggaactcggtgatatcaga
tgtttagcattggagaaagtggcggaatcccttgagatgccttgcaaatactacaacttg
ggatgcccagaaatatttccctattacagcaaactcaaacatgaggcaatgtgcaactac
agaccatacaattgtccctatgctggatcagaatgttctgttgtcggggatattcctttc
ctggttggccatctgcgggatgaccacaaggtggacatgcatactggctgcacatttaac
catcgctatgttaagtccaaccctcgggaagtagagaatgctacctggatgctaacagtc
ttccattgctttggtcagtatttttgtcttcactttgaagctttccagcttggcatggcc
cctgtctacatggcatttctccgtttcatgggtgatgaaacagaggctaggaactatagc
tatagccttgaggttggagcaaatggccgaaaacttatatttgaaggcaccccacgtagc
atccgtgatagtcaccggaaagtcagggacagccatgatggtctaattatccaacgtaac
atggcacttttcttctctggtggggataggaaggagctgaagctgagggttacagggagg
gtatggaaggaacaacaaaatccagatactggtgtatgcataccaaacttatgcagctga
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