Gossypium raimondii: 105791277
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Entry
105791277 CDS
T04129
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105791277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105791277
03036 Chromosome and associated proteins [BR:
gra03036
]
105791277
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105791277
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105791277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
105791277
NCBI-ProteinID:
XP_012474743
UniProt:
A0A0D2MXK0
LinkDB
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Position
8:complement(33803905..33811403)
Genome browser
AA seq
995 aa
AA seq
DB search
MFGTTNPTLKTAFGQPASSPFGQTNPSSNPFAPKSSFGSPTPFGSQTGGSLFGGTSTGVF
GAAQPSSPFSSTTTFGASSSPAFGSSMPAFGSSSTPAFGNSSSSFGGPSGFGQKPAFGFG
STPTQSSPFGSSGQQSQPTFGSGIFGSSTPFGSTQSAFGATSTAAFGATSTPAFGATSTP
AFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGSTSSPAFGSTGSPFGSTGTAFGVSN
APAFGASSTPAFGTSSTPAFGASSTPSFSFGSSPAFGQSTAAFGSSPFGTTTVGAQSSPF
GSQSSSPAFGSTTFGQSAFGGQRGGSRVAPYTPTTDADSGSGTQPAAKLESISAMHVYKD
KSHEELRWEDYQLGDKGGPQPAAQPSGGIGFGVSAAPASPFGSSSTIGQTSANPFSGTSA
NPFSIKPPSFNSASFTTSTTTSNPFQSTSSSLFGPSSSTTPSIFSSSAPAFGTGSSLFSS
SVTPSFSSSPSIFGTGAAPATTPTFATGLNFGSSQGSSLFTSTPAIGQASSTFGQNTSSF
GPTSIFNTPSTGFSGNMFSSSLSLPPSSNPTAFGSTTPSFASPFQPAQTSGAFSFSNLGQ
TQMSGGSGIFGQSNVGLPSVTQNAAVVQPVTISNPYGTLPAMPQMSIGRAGTAPSVQYGI
SSMPVTDKPVPVRISPLLTSRYISQRRIRLPARKYHPNNGNPKVPFFNDDEETPSTPKAD
AVFIPRENPRALVIRPTENWPSRASVEKVLPLKDASSLVHENGKVSDDGFNAEDKDKNPA
ENGLVKEQIHHNQKANGVHDDHSVQKEDSFRTLSGHRAGEAAIVYEHGADVEALMPKLRR
SDYYTEPRIQELAAKERAEPGYCRRVKDFVVGRHGYGSIKFLGETDVRCLDLESLVQFNN
REVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKRTREQYTEGPKVEKYKEMLKKKAED
QGAEFLSYDPIKGEWRFRVNHFSKYKLEDEEEDVL
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtacaactaacccaactcttaaaacagctttcgggcaaccagcaagtagccca
tttggccagaccaatccaagtagcaatccgtttgcacctaaatcttcctttggtagtcca
actccttttggctcccaaacagggggttcactatttggtggtacttctactggggtgttt
ggtgcagcccaaccttcttctccattttcctcaacaacaacctttggtgcatcatcatct
ccggcatttggaagttccatgcctgcttttgggtcttcgtctactcctgcttttggcaat
tcatcatcatcttttggtgggccttctggttttggtcagaagccagcatttggttttgga
tctactcccactcaatcaagtccttttggaagctcagggcagcaatcacaacctacattt
ggtagcggaatatttggttcctccacaccctttggttcaacacagtctgcatttggtgcc
acaagcaccgctgcgtttggtgccacaagcacccctgcctttggtgccacaagcacccct
gccttcggtgccaccagtacccctgccttcggtgccacaagcacccctgctttcggtgcc
acaagcacccctgctttcggtgccactagtaccccagcctttggttccacaagcagccct
gcctttggttcaactggaagtccttttgggagcactggaactgcatttggtgtgtctaat
gccccagcatttggagcatcaagcacacctgcttttggcacatctagcactccagctttt
ggagcgtcttctactccttccttcagctttgggtctagccctgcttttggacaatcaaca
gcagcatttggtagtagtccttttgggacgactacagttggagcacagagttcccctttt
ggaagccaatcctcttctcctgcatttggaagcacgacctttggccagtctgcatttggg
ggtcaacgtggaggcagtagagtagctccttatacacctacaactgatgcagatagtggg
agtggtacacagcctgctgcaaaattggagtcaatatcagcaatgcatgtttacaaagat
aaaagtcatgaggagctgagatgggaggattatcagttaggagataaaggtggaccgcaa
ccagctgctcagccttctggagggattggctttggtgtgtcagctgcacctgcaagtcct
tttggctcttcttcaacaattggtcaaacatctgcaaatccattttccggcacgagtgct
aatccatttagtataaaacccccatcctttaatagtgcaagttttacaacctcaactact
acatcaaatccttttcaatcaacatcatcaagcctttttggcccatcttcatcaacaaca
ccttcaatatttagttcttcagctcctgcatttggaactggttcatctctttttagttca
tctgtaactccttcattttcatcttcgccatccatatttggtactggtgcagctccagca
acaacacccacatttgccactggtttaaattttggcagcagtcaggggtcttctctgttc
acttctacccctgcaattgggcaggcaagctctacctttggacagaatactagtagcttt
ggtccaactagcattttcaatacaccttccactgggtttagtgggaatatgttttcgagc
tctctgtcattgcctccttctagcaacccaactgccttcggctcaacaactccctctttt
gcttcacctttccagccagctcagacttctggagctttcagctttagtaatcttggtcag
acacaaatgagtggtggatctggcatttttggtcagagtaatgttggcctaccgtctgtg
acacaaaatgctgctgtagtacaacctgtgactattagtaatccctatggaacactcccc
gcaatgcctcaaatgtcaattggtcgggctgggactgcaccatctgttcaatatgggatt
tctagcatgcctgtcacggacaaacccgttcctgttagaatatcgcccctgttgacttca
cggtacatttcacaaagacggattaggttgcctgcaaggaaatatcatcctaataacggc
aatccaaaggttccatttttcaatgacgatgaagagacacccagcacacctaaggctgat
gctgtttttattcctagggaaaatccaagggctctggttatccgtcccactgaaaattgg
ccttcaagagcttctgtagagaaggtattgcctttgaaggatgcatcctctctggtgcat
gagaatggcaaagtttctgatgatggcttcaatgctgaggataaagataaaaatccagct
gaaaatggccttgtgaaggagcagattcatcataaccagaaagctaatggagtccatgat
gatcattctgtacagaaagaggattcgttcaggacactcagtggccacagggctggtgag
gctgctattgtgtatgagcacggggctgacgttgaggctctaatgccaaagctcaggcgt
tctgattactatacagaaccccgaatccaagaactggcagcaaaggaaagggctgaacca
gggtactgtcgccgtgtcaaggactttgtggttgggcggcatggttatggaagcataaag
ttcctgggtgagacagatgtgagatgccttgatctagagtcccttgtacagttcaacaac
cgtgaggtaattgtttacatggatgacagcaagaaacctcctgttggacaaggtcttaat
aaacctgcagaagtaacgcttctcaacatcaagtgcttcgacaaaaggaccagagagcag
tatacagaagggccaaaagtggagaaatataaggagatgcttaagaagaaggccgaggac
caaggagcagagtttctctcctatgatcccatcaaaggagaatggaggttcagggtaaat
cacttcagcaagtacaagttggaagacgaagaggaagatgtgctgtaa
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