Gossypium raimondii: 105791533
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Entry
105791533 CDS
T04129
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
gra
Gossypium raimondii
Pathway
gra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105791533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gra03400
]
105791533
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
105791533
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
AnfO_nitrog
DUF1400
Motif
Other DBs
NCBI-GeneID:
105791533
NCBI-ProteinID:
XP_012475069
UniProt:
A0A0D2RZX3
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Position
8:43270967..43273741
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AA seq
666 aa
AA seq
DB search
MAMPVEMEMEERGKVGALIEKATNSTAAEVDPRLLKAIKSVVRFSDSELRLAAHTLMDLM
KRDHSQVRYLTLLIIDELFMRSKLFRALLVENLDQLLALSVGFRRNMPLPAPPAIASTLR
SKAIEFLEKWNASFGIHYRQLRLGFDYLKNTLRFQFPNLQETAARIERERRERERRTREI
LQNKFETLKTNFSSVKEEIQATVDEIGECLDIVRTKEEGVPHVLLDGEDFVEFRSSELRQ
IRLDSLKEGEKVHENSDNKVVFDALRELYKLLVTKHLVSVQEWISLLVRVEVADNRSRDS
MLKELIDIRNSLMSVKKDCEESGCTLPKTVNKNEEEEEDFWEEGNFGLTENGSTTEPEKR
REVHSSNIEKKSKSVEDRNSKKSNKQSGNLAKVSASCKVKAKDKECSSSKGKECSGSEKS
ARSELLAEAPVLRWGSFMDNWGLVSNKDTLLNQKGLEFDNHWGRVDYDAVIPAEKIAELN
LQAIVYEENLGEIQPCRAPLKKGGLCQRRDLKICPFHGPIIPRDDAGNQINQSSSTDDTD
PGLGSDLAEQLAKQAVKNVRERDKEDARKRKLAKQSLQREKLARVREHNDAVLRDAAIAS
TSRSTVFGEDMGETVGENPVGRNKQTLASMLRKKVTTKDRLAQRLLNTRATEATLRQMTQ
GEDATY
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgccggtggagatggagatggaggagagaggaaaagtcggggctttgatagaa
aaagccacgaattcgaccgctgccgaggttgatccacgtcttctcaaagcaatcaaatca
gtggtgcggttctccgattcggagctacgactcgccgcccataccctcatggacctcatg
aaacgcgatcattcccaggttcgttatctcacgcttcttataattgatgaacttttcatg
cggtctaagctttttagagcccttttggttgagaacttagatcagttattggccttaagt
gttgggtttagaagaaatatgccgctcccagctcctccggctattgcatcaactttgcgt
tccaaggcaattgagttcttagagaagtggaatgcatcttttgggattcattacaggcag
cttaggttaggttttgattatcttaagaatactctcaggtttcagtttcctaaccttcag
gagaccgcagcaaggatagaacgagagaggagggaaagagagagaaggactagggagatt
ttacagaacaagtttgaaacgttgaaaacgaattttagttctgttaaggaagaaatacag
gctacagttgatgagattggagaatgtttagatattgttcgcactaaagaggaaggcgtg
ccacacgtcttattggatggcgaagattttgtagagtttcgatcttctgagttgaggcag
atccgtcttgattcattaaaggaaggagaaaaggttcatgagaacagcgataacaaagtg
gttttcgatgcattaagagagctgtataagcttttagtaaccaagcatctggtttcagta
caagaatggatatctcttcttgtaagggttgaagtggctgacaacaggtcacgagattcc
atgttgaaggagttgattgatatccgaaacagtctcatgtctgtgaagaaggattgtgaa
gaatctggttgtactttacccaaaactgtgaataaaaatgaagaagaggaggaagacttc
tgggaggaaggtaattttggattgactgagaatggaagtactactgaacctgagaagcga
agggaggttcacagttccaacattgaaaagaaaagtaaatctgttgaggataggaattct
aagaagtctaataaacagagtggaaatcttgctaaagtgtcagcttcttgcaaggtgaaa
gccaaagataaagaatgcagtagttctaagggcaaagagtgttcgggtagtgaaaagtct
gctaggagtgagcttttggctgaagctccagttctcaggtggggttctttcatggataat
tggggcttagtctctaacaaggatacattattaaatcagaaaggcttggagtttgacaat
cactggggaagagtagattacgatgccgtgattccagccgagaaaattgcagaattgaat
cttcaggcgattgtttacgaggaaaacttaggagagatccaaccatgtcgtgcgcctttg
aaaaaaggtggactttgtcagagaagagacttgaagatttgcccatttcatgggcccatt
atacctcgtgatgatgcaggaaaccaaatcaatcagagttcttcaacagatgatacagat
cctggtttaggctctgatttggcagagcagttagcaaaacaagctgtgaagaatgttagg
gagcgagataaagaggatgcaaggaagagaaaacttgctaaacagtcattacagcgggaa
aagctagcaagagttcgggaacacaatgatgctgttcttcgtgatgctgcaatagcttca
acatcaagatcaacagtgtttggagaagacatgggggaaactgttggtgagaatccagtg
gggagaaacaaacaaactctagcatccatgctgcggaagaaagttacaacaaaagatagg
ttagctcagagacttttgaacacccgggcaacagaggcaacgctaagacagatgacccag
ggtgaggatgcaacttattga
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