Gossypium raimondii: 105791722
Help
Entry
105791722 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105791722
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105791722
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
105791722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
105791722
NCBI-ProteinID:
XP_012475385
UniProt:
A0A0D2MZE9
LinkDB
All DBs
Position
8:46792012..46793846
Genome browser
AA seq
339 aa
AA seq
DB search
MASPPPPLFYGVMGGGAVNFDENYNTSDRLHSSSSIDNVKPSIIVIILILSITVLLSVSL
YLLLRHLNRRCLSRVFRSSASNITASASHRVTPEQSPVPSFLDSLPMFTFSSITRRSNNG
STVSGDCAVCLSKFEPLDQLRLLPLCCHAFHAQCIDAWLTTNQTCPLCRSSLFASESDLM
KVLLQSSNAACAFTSGGTDSFRLEIGSISQQRTGSDSGDQRRSYSIGSFDYIVEEESQLN
RNQIHQRNMSDKEEVGRAEAISEASLAAEVANGRSRLKEYVDRLSFSLSSRAMSFRSSGR
LVNGSSGRSDISGADGDYDVEANRIGEEISEMFRWFSGV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgccgccgccgcctttgttttatggcgttatgggaggaggggctgttaacttt
gacgaaaattataacactagtgaccgcttgcattcttcctcgtcgatcgacaatgtgaag
ccgagtattatagtcataattttgatcctttctataactgtgcttctctccgtctctctt
tatctcctccttcgccacctcaatcgccgatgcttgagtcgtgtctttcgttcttctgcc
tccaatatcaccgcctccgccagccaccgtgtcactcctgaacaatcgccggtgccttcg
ttcctagattctctccctatgtttacattctcttccattactcgccgctccaacaacggc
tcaacggtttccggagattgtgccgtttgcttgtcgaagtttgaaccgctggatcaactc
cggctgcttcctctctgttgccatgcgttccacgctcaatgcattgatgcttggctcact
acaaaccagacttgtcctctttgtcgctcatctctattcgcctccgagtccgatcttatg
aaggttttacttcagtcgtccaacgcagcctgtgcatttacaagtggcggtaccgatagt
ttccggctcgagatcggctctatcagtcagcagcgaacaggctctgactccggtgatcag
agacggtcttattccattggatccttcgattacattgtcgaggaagaatcgcagctgaat
aggaaccaaatacaccagagaaatatgtccgataaagaagaggttggaagagctgaggca
atatcggaagcgagcctcgccgcggaggttgctaacggaaggagtcggcttaaggagtac
gtggacaggctctctttttcgttatcatctcgtgccatgtcatttcgtagctcaggaagg
ttagtcaacgggagcagcggccgaagcgacatatccggtgccgatggagattacgacgtg
gaagccaatcgtatcggcgaggagatcagcgaaatgtttcgctggttctcgggggtataa
DBGET
integrated database retrieval system
