Gossypium raimondii: 105792250
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Entry
105792250 CDS
T04129
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105792250
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gra04040
]
105792250
Membrane trafficking [BR:
gra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
105792250
Ion channels [BR:
gra04040
]
Other channels
Mechanosensitive channel (Piezo)
105792250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
105792250
NCBI-ProteinID:
XP_012476188
UniProt:
A0A0D2PG20
LinkDB
All DBs
Position
8:complement(55129945..55144906)
Genome browser
AA seq
2487 aa
AA seq
DB search
MGSFLIGFALPLLLLTASLLNWSLISLVDLIAFLLIQYTAPKIGFRFRRKYLLLWPVIIF
SLLVFLSQVAYLVIWAVGGYKQSVGDAWWLKLIGFMIIQSWRSPTVIYFLVTQLLVLVVA
LLDIHGNRFGLVPWRYTCWGHFLTVVEQLGSHLKVASCLLLPAIQLVVGISHPSWISLPF
FIGSCIGLVDWSLTSNFLGLFRLWKALQFYAGFSIFMLYVYQLPIEFSSMLQWIADFVGL
FKICSTSEWTEICSSVSLVLFYIMLSYVKCDLEEMDFIMSTRESSLTEQLLPSKHSFFIR
ESRSGVRHTNVLLRGTAFRTFTINFFTYGFPVSLFALSFWSFHFASICAFGLLAYVGYIV
YAFPSLFRLHRLNGLLLVFILLWAVSTYIFNVAFAFLNRNFGKDMEIWEMVGFWHYPIPG
FFLLAQFCLGILVALGNLVNNSVFLYLSDEDALSLNNSAVEVDGETKVFIVATIAWGLRK
CSRAIMLALIFIIAMKPGLIHAVYLVFFLIYLLSHNISRKIRQSLILLCEAHFALLYLLQ
IDLISNALEQKGSIVLEIMSQLGLHKHNSSLNFLEIALLACFCAVHNHGFEMLFSFSAIV
QHTPSPPVGFSILRAGLNKSVLLSVYASPSASYYHDNPSYERRIASFLSEIGQKFLSIYR
SCGTYIALLTILLTVYMVTPNYISFGYIFLLLVWIIGRQLVERTKRRLWFPLKIYAIMVF
IIIYSLSSFTSFKIWLSGFINLYFYLGYDPEASLLDNIWQSLAVLIVMQLYSYERRQSKY
NRTYHPNPLGSGILGFAKRFLIWHSQKVLFVSLFYASLSPICAFGFLYLLGLVICSTLPK
ASQIPSKSFLVYTGFLVTSEYLFQMWGKQAEMFPGQKHSDLSLFLGIRAYEPGFWGIESG
LRGKVLVISACILQYNVFRWLDNMPSGISNKGKWEEPCPLFLPAEDNYTNGYMSNGEDKP
SSSVGTEPIRQDRAASNSWSSLSSAFSQAPHHGSSKAAGGSEVNGVRKFSFGYFWGSTKE
SHKWNKKRILALRKERFETQKALLKIYLKFWIENMFSLYGLEINMIALLLASFALLNAIS
MLYIAVLAVCILLNRQIIRKLWPVLVFLFASVLVLEYFAIWKSMFPLNQNKPSQSEIRCH
DCWKSSASYFQYCRSCWLGLIIDDPRMLISYFLVFLLACFKLRADHLSDFSGSSTYRQML
SQRKNSFVWRDLSFETKSMWTFLDYVRLYCYCHLLDLVLVLILITGTLEYDILHLGYLAF
ALVFFRMRLEILKKKNKIFKFLRIYNFVVIVLSLAYQSPFVGEFSSGKCNTVSYIYEVIG
FYKYDYGFRITARSALVEIVIFMLVSLQSYMFSSHESDYVSRYLEAEQIGAIVHEQEKKA
AWKTAQLQQIREAEEKKHQRNLQVEKMKSEMLNLQIKLHSMNSVATFGDVTPDDEGLRRR
RTSLTSNRDVGPLDKEESSLWKQEQVNKQDSVFPPETHTYAAYMKAENPEVVESPKNSME
YAPCEITEIESDADSAFLDSERSRKNQAKEHPLISAVHLLGDGVSQVQSIGNQAVNNLVN
FLNIAPEDSDMNEHSFVEDEAFDEMEGQKMQNIHLNRSSSLQSDKSSDATSLQLGRIFRH
IWSQMWSNIDVVCYCLFVLVFLWNFSLLSMVYLAALFLYALCVNTGPTYIFWVVMLIYTE
VYMLLQYLYQIVIQHCGLSIMSDLLREIGFPAREIKSSFVVSSLPLFLVYLFTLLQSSIS
AKDGEWMPSTDYNSHRRSSLYRKEVLVNYSWSERVSELFQFVINTAKLVIRSFFWYWKSL
IQGAETPPYFIQVSVDVHLWPEDGIQPERVESGMNQLLRLVHDERCTQTIPSNCPFASRV
QVQSIERSRESPNVALIVFEVVYASPLTGCTSADWYRSLTPAADVAKEILGAQRAGFVEA
TGFPYQILSVIGGGKREFDLYAYIFVADLTVFFLVAMFYQSVIKNKSEFLDVYQLEDQFP
IEYVTILIIIFFLIVVDRILYLCSFATAKVVFYLFNFVLFTYSITQYAWRMEPSDQHAAR
LVLRAIFLAKAVSLALQAVQIRHGIPHKSTLFRQFLTSEVSRINYLGYRLYRALPFLYEL
RCVLDWSCTTTSLTMYDWLKLEDINASLYLVKCDALLNRAQHKQGEKQTKMTKCCNGICL
FFILICVIWAPMLMYSSGNPTNIANPIKDATFQIDISTIGGRLTLYHTTLCEKIPWDKLN
SDANLDPLNYLDTYNKNDIQLICCQADASTLWLVPDVVQRRFIQSLEWDMDMGITSTWLL
SRDRPKGKEVAKYEKPLDPKDLPDRSDVQKVFNGSANGFRVYNLYSRYFRVTGSGEVRTF
EPEVNSVSLVSADLVINRATFEWWSFHIINSSDMVHCGGFSGPMAIVVSEETPPQGILGD
TLSKFSIWGLYITFVLAVGRFIRLQCSDLRMRIPYENLPSCDRLIAICEDIYAARAEGEL
GVEEVLYWTLVKIYRSPHMLLEYTKPD
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atggggagttttctaattgggtttgctttgcctttgctgcttctcacagcttcattgctc
aattggagtttgatctctcttgttgatttgatcgctttccttctcattcagtatactgca
cctaaaataggatttcgtttcaggaggaaatatttgttactgtggcctgttatcatcttt
tccctacttgtttttctttcacaagttgcatatcttgttatatgggctgttggaggctat
aaacagagtgtaggagatgcttggtggctcaagctaattggttttatgataatccagtct
tggagatctcccactgtgatctattttttggttacccaacttctagtgctagtagttgca
ttgcttgatatacatgggaacagattcggtcttgttccgtggcggtatacttgttggggt
catttcttaacagttgttgaacaattaggttcccatcttaaagttgcttcctgtttgctt
ctacctgctattcagctggttgtgggaattagccatccctcgtggatttctctgccattt
ttcattggaagctgtattgggctagtggattggtctttgactagcaattttctaggacta
ttcaggttgtggaaggctctccagttttatgcaggcttcagcattttcatgctttatgtg
tatcaactccctatagagttctcaagtatgttacagtggatagctgattttgttggtcta
ttcaaaatatgttcaacatctgagtggactgaaatttgctcttctgtttctcttgtactt
ttttacatcatgctatcctacgtcaaatgtgatttggaggaaatggattttatcatgtcc
acgcgggaaagtagcttgacagagcaactacttccttcaaagcattcattcttcattcgt
gaatcaagatctggtgtaaggcataccaatgttttactacgagggacagctttccggact
tttaccatcaactttttcacttacggttttccagtatccttgtttgctctttccttttgg
agtttccattttgcaagtatatgtgcttttgggctacttgcatatgttggctacattgtg
tatgcatttccttccctgttccgtttgcaccggttaaatgggcttctccttgtcttcatt
cttttgtgggctgtaagcacctatatattcaatgtggcatttgctttcttgaataggaat
tttgggaaggatatggaaatttgggagatggttggattttggcattatcccatacctgga
ttttttttgcttgcacaattttgtcttggaattttggttgctttggggaatcttgtaaat
aattctgttttcctctatttatctgatgaggacgctctatcattgaacaactctgctgtg
gaagtggatggagagaccaaggtgttcattgtggctacaattgcatggggactgcgcaaa
tgttctcgagctatcatgcttgcactgatatttatcatagcaatgaaacccggattaatc
catgctgtctatttggttttctttttgatctatcttttgagccacaacatcagcagaaag
attcgtcagtctctgattcttctttgtgaagctcactttgcattattgtaccttcttcag
atcgatttgatctctaatgctttggagcaaaaaggctccattgttttggaaatcatgtcg
cagttgggtctccataaacataacagttcattgaactttctggaaatagctttgcttgct
tgcttctgtgcagtccataaccatgggtttgagatgctattttcattctcagcaattgtg
cagcacacccctagccctcctgttggatttagcatcttgagagctggtctgaacaagtct
gtcctcttgtcagtctatgcatctccaagcgcctcctactaccatgataatccttcttat
gagagaaggatagcatcattccttagcgaaattgggcagaagtttttatcaatatatcga
tcatgtggaacctacattgctttgctgactattcttctcacagtatacatggtgacaccc
aactatatatcatttggatacatcttccttctccttgtttggattattggaagacaactt
gttgagagaactaaaaggcgcctatggtttccattaaaaatatatgcaattatggtgttc
attattatctatagcttaagcagttttaccagctttaagatttggctctctgggtttata
aatctctatttttatttgggttatgatcctgaagcttcattgttggataatatttggcaa
tctctagctgttctaattgtgatgcaactttatagctatgaaaggaggcagagcaagtac
aacagaacttaccatcccaatcctttaggttctgggatacttggctttgccaagcggttt
ctgatttggcacagccagaaggtcctgtttgtctcattattctatgcatctttatctcca
atttgtgcttttggattcttgtatctacttggccttgtcatatgttcaactttacctaaa
gcttctcaaatcccatccaaatcattcttagtttatacaggatttctggttacatcagag
tatctttttcagatgtggggtaaacaagctgaaatgtttccagggcaaaagcattctgat
ttgtcgctctttttgggtattcgtgcatatgagccaggattttggggtatagaatcgggc
ttgagaggaaaggttctggtaatttctgcatgcatccttcagtacaatgttttccgttgg
ttggataatatgccaagtggtatttcaaacaaaggcaaatgggaagagccctgtccttta
tttttaccagcagaggataactacaccaatggctacatgtctaatggggaagataagcca
tcttctagtgttgggacagaacctataagacaagacagagcagcaagcaattcatggtca
tctttgagcagtgctttttctcaagcacctcatcatggatcctccaaagcagcaggaggt
tctgaggttaatggtgtgagaaaattttcatttggatatttctggggaagcaccaaggag
agtcataagtggaacaagaagcgaatccttgcattaaggaaagagagatttgaaacacag
aaggctctcttaaaaatatatttgaaattctggatagagaacatgtttagcctttatggc
ctggagattaacatgattgctttgcttctcgctagttttgctttgttgaatgccatctct
atgctatatattgcagtgcttgctgtttgtattcttttgaatcggcagattattcgtaaa
ttatggccagttcttgtcttcttgtttgcttctgttctcgtcctcgagtattttgccatc
tggaagagtatgttccctctgaatcaaaataagccaagtcagtctgaaatccgttgccat
gactgctggaaaagctcggcttcatattttcagtattgcaggagctgttggctgggactg
atcattgatgatccccgaatgcttattagctatttcttggtctttctgctggcatgtttt
aagcttcgtgcagatcacttgtctgatttctcaggttcatcaacatatcggcaaatgttg
tctcaacgtaaaaattcatttgtttggcgagatctctcttttgaaaccaaaagcatgtgg
acctttctcgactatgtaaggctttattgttattgccatctattggacctggtccttgta
ttgattttgattactggaactcttgagtatgatattcttcacctgggttatcttgctttt
gctcttgtttttttccggatgaggcttgaaattctcaagaaaaagaataaaatattcaag
ttcttgcgtatctacaactttgtggtgatcgttctttctcttgcttatcaatcacctttc
gtgggggagtttagttctggaaaatgcaatactgtgagctacatatatgaagtcattgga
ttttacaagtatgactatgggtttcgaattactgccagatccgcacttgttgagattgtc
atatttatgttggtatcacttcagtcatatatgttttcctcccacgagtctgattatgtg
tcacgataccttgaagcggagcaaattggtgccattgtacatgagcaagagaaaaaagct
gcttggaaaactgcgcagttgcaacagattcgtgaagctgaggagaagaaacatcaacgc
aacttgcaagtggagaagatgaaatctgagatgcttaacttgcaaataaagctccatagc
atgaattctgtcgcaacttttggtgatgtgactcctgacgatgaaggcctacggaggagg
aggacttctcttacttcaaatagggatgttgggcctcttgacaaagaggaaagctctctt
tggaagcaagaacaagttaataaacaagattcagtgtttccccctgaaacacacacatat
gctgcttatatgaaagcagaaaatcctgaagttgtggaatctccaaagaattcaatggaa
tatgcaccttgtgagatcactgaaattgaatctgatgctgatagtgcttttttagattca
gagagaagtaggaaaaaccaagcaaaggagcatcctttgatttctgcagtacacctcctc
ggtgatggcgtttcccaggtacagtctattggtaatcaggcagttaataaccttgtaaat
ttcttaaacattgcaccagaagattccgatatgaatgagcattcatttgttgaggatgag
gcctttgatgagatggagggccaaaagatgcagaatatccatttgaaccgttcatcttct
ctgcaatctgataaaagttctgatgctacgagtttgcagctggggcggatctttcggcat
atatggtcccagatgtggtctaatatcgatgttgtgtgctactgtttgtttgtcctcgtc
tttctttggaacttcagtttgctatctatggtgtatcttgcagctcttttcttgtatgct
ctatgtgtgaatacaggtccgacttatatcttctgggttgtcatgctgatttacacggaa
gtttatatgttgcttcagtatctgtatcaaattgtaatccagcattgtggattgagtatc
atgtcagacctgctccgtgaaataggatttcctgctcgtgaaatcaaatcgtcatttgtt
gtgagttcgttgcctctatttcttgtgtacttatttaccctcttacaaagctctataagt
gcaaaagatggtgaatggatgccctctactgactataattcccataggaggagttctctt
tatagaaaagaggttcttgtgaactatagctggagtgaaagggtatcagagttgttccaa
tttgtaataaacacggcgaaactggtaattagaagcttcttctggtactggaaatcattg
atacagggagcggaaactcctccttactttattcaagtttcggtggatgttcatttgtgg
ccagaggatgggattcagccagaaagggttgagtctggaatgaatcaactgctcaggcta
gttcatgatgagagatgtactcaaacaatccctagtaattgtccatttgctagtagggtc
caggttcaaagcattgaaagaagtcgagaaagcccaaatgtggctctgattgtttttgag
gtggtgtatgcatctcccttgacaggatgtacctcagcagattggtacaggtcactaact
ccagcagctgatgtggcgaaagaaattcttggggcacagcgtgctgggtttgttgaagca
acgggattcccataccaaatactctctgtaattggtggtggaaaaagggaatttgatctg
tatgcttacatatttgttgctgatctgactgtgtttttcctagttgcaatgttctaccag
tctgtcataaagaacaagagtgaatttcttgatgtttatcagctagaagatcaatttcct
atagaatatgtaactatcttaattatcatttttttcttgattgttgttgatcgaatactt
tatctctgttcattcgcaacagcaaaagttgttttctaccttttcaattttgttctcttc
acatattcgattacacagtatgcttggcgaatggaaccttccgaccagcatgctgcacgg
ctagtactgcgtgctatatttcttgctaaagcagtttctctagcacttcaggctgtacaa
atccgacatggaattcctcataaaagcaccttgtttcgacagtttttgaccagtgaggtc
tcacgaattaattacttaggctatagactttatcgggctctgccatttctttatgaatta
cgatgtgtacttgattggtcatgcacaacaacatctttgaccatgtatgactggctcaaa
ctggaagacataaatgcaagcctgtacctcgtcaaatgcgatgctttgttgaatagagct
cagcacaaacaaggagaaaagcaaacaaaaatgaccaagtgctgcaatgggatatgtctg
ttctttatcctaatttgtgttatctgggctcctatgctgatgtacagcagtggcaatccg
acaaatattgcaaaccccatcaaagatgcaacttttcaaatagacatcagtaccattggt
ggaaggttgaccttgtatcatactaccctctgtgaaaagatcccatgggataagctcaat
tccgatgctaatctagatcccctaaattatttggacacttacaataagaatgatatacaa
ttgatatgctgccaagcagatgcgagtactttgtggctcgttcccgacgtggttcagaga
agatttattcagtcccttgagtgggatatggacatgggtatcacatctacttggctgctt
tcaagggatcggccaaaaggcaaggaagttgcgaaatatgaaaaacctctagatcctaag
gatcttcccgatcgatctgatgttcaaaaggttttcaatggttctgcaaatggctttagg
gtatacaatctttattcaagatacttccgtgttaccggttctggtgaggtcagaactttt
gagccggaggtcaattcagttagtttagtgagtgcagatcttgttatcaatcgagcaact
ttcgagtggtggtccttccatattatcaattcatctgatatggttcactgtggaggtttc
tcaggaccaatggccattgtagtatccgaagaaactccaccacagggtattcttggagac
acactaagcaaattcagcatttggggtctctacataacttttgtactagctgttggccgg
tttatcaggcttcaatgctccgacctaagaatgagaataccgtatgaaaacctgccttcc
tgtgacaggttgatagccatttgtgaggatatatatgctgcgagagcagagggtgagctt
ggagtcgaagaggtcctttactggaccctagtgaagatttacagatcaccgcacatgcta
cttgagtacactaaacctgactag
DBGET
integrated database retrieval system
