Gossypium raimondii: 105792365
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Entry
105792365 CDS
T04129
Name
(RefSeq) serrate RNA effector molecule
KO
K27103
serrate RNA effector molecule
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105792365
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
105792365
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
105792365
NCBI-ProteinID:
XP_012476362
UniProt:
A0A0D2PGT1
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Position
8:complement(56524961..56530531)
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AA seq
737 aa
AA seq
DB search
MAKVINMPVDSLDRRRGGDRKDNNNNNNRQLPPSDDPNLSPPAPPPPRRRDRDSRERRDR
DYYDRNRSPPPPPTRERDYKRRSSISPPPPPLNYRDRRHSPPPRRSPPYKRSRREDGGYE
GRRGSPRGGFGPGDRRFGYDYGGGYDREMMGRPGYPDDRPHGRYFGRSSGGYQDWDSGRG
RYGDASNSGTTQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYIATQKRAFFDAHKD
EEWLRDKYHPTNLVTVIERRNELARKVAKDFFLDLQSGTLDLTPGVNALSANKSGQTSEP
NSEDETDIGGKRRRHGRGPTKETDILSLAPKAHLVSSDPRRIQIDIGQAQGLVRKLDSEK
GIEENILSGSDNDKISRDKSHGSFAGPVIIVRGLTSVKGLEGVELLDTLITYLWRVHGVD
YYGMIETSEAKGFRHVRAEGKISDITSNGSEWEKKLDSYWQDRLRGQDPLEVMTAKDKLD
AAAVESLDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVR
EELYFQNYMNDPDAPGGTPVMQQPIPKDKPQRRKVMENRLKDERGLRRERDNRANGSDRF
DRSENPQSSDFPSNNDGPDGGNHDDPMFDAFGGQGMHVAAPFSSDIAPPPVLMPVPGAGP
LGPFVPAPPELAMQVFRERGGPPFEGNSRSGRPGPNLSGPAPFLLPPGFRQDPRRLRSYQ
DLDAPEDEVTVIDYRSL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtcataaacatgccggtcgattctctagatcgccgcaggggcggcgaccgt
aaagataacaacaataataacaacagacagcttccgccatctgacgatcccaacttatct
cccccagctccgcctcctcctcgacgccgcgaccgagattcgcgtgagcgacgggaccgt
gactactacgatcgcaaccgctctcctccgcctccgcctaccagagagagagattacaaa
cggcgtagtagcattagccctccaccaccgccgttgaattacagggataggagacactcg
cctccgcctcggaggtctccgccttataagaggtctaggcgtgaggatggagggtatgaa
gggaggagagggagccctagaggcggatttggacccggcgatagaaggtttgggtatgat
tatggtggtggatatgatcgcgagatgatgggcaggcccggttaccctgatgataggcct
catggtcggtactttggtcgctcttctggtggttatcaagattgggattcaggccgtggt
agatatggtgatgcttctaattcagggactactcaaagagaaggattgatgtcatacaag
caattcattcaagagcttgaggatgatatactaccagctgaagctgagcgcaggtaccaa
gaatacaagtcagagtatatagctacccaaaaaagagcattttttgatgcccacaaagac
gaggaatggttgagagacaaatatcatccaacaaacttggtcactgttattgaaaggagg
aatgagcttgcacgcaaagttgcgaaggactttttccttgatctgcagagtggaacactg
gacttaacacctggtgtcaatgctttgtcagcaaataaatccggacaaaccagtgaacct
aattctgaagatgaaacagacattggtgggaaaagaaggcggcatggtaggggacctact
aaagaaactgatattctttctctggctccaaaggctcatctagtcagttctgatcccaga
agaattcagattgacattggacaagctcagggccttgtacgtaaactggactctgaaaaa
ggaattgaggaaaatattttaagcgggtcggacaatgacaaaataagtagggacaaatct
catggtagttttgcaggcccagtgattattgtacgtggcttgacttctgtaaaaggcctg
gaaggtgttgagcttcttgatactcttataacttacttgtggcgtgtccatggtgtggat
tactacggtatgattgaaactagtgaagctaagggttttaggcacgtgagagcagaggga
aagatttctgatattactagtaatgggtctgagtgggaaaagaaactggactcatactgg
caagatagattgagaggtcaagatcctttggaagtaatgactgctaaggacaaactagat
gctgccgctgttgaatctttggatccttttgtccggaagataagggatgaaaagtatggt
tggaagtatggttgtggtgctaagggttgcacaaagctctttcatgctgcagaatttgtg
cacaagcatcttaaactgaaacatccggaacttgtgatcgagctaacgtctaaagtgcgt
gaagagctctatttccagaactacatgaatgatccagatgcgcctggtgggacacctgtt
atgcagcaaccaataccgaaggacaagcctcagagacgtaaagtaatggaaaatcgcttg
aaagatgaacgtggcttacgcagagaacgtgataatcgagctaatggtagtgacagattt
gatagatctgagaaccctcaatcaagtgattttccgtccaacaatgatggtcctgatggg
gggaatcatgatgatcctatgtttgacgcttttggtggacaagggatgcatgttgcagct
ccattttcttcagatattgcacctccaccagtattgatgcctgttcccggtgctggtcca
ttggggcccttcgttccagctccacctgaacttgcaatgcaagtgttcagagagcggggt
ggtcctccttttgaaggcaatagtagaagtggacgccctggaccaaatttaagtggacca
gccccctttcttttgcctcctggcttccgacaagatcctcggcgcttacgaagttaccaa
gacttagatgcacctgaggacgaagtcacagttatagactatcggagtttgtag
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