KEGG   Gossypium raimondii: 105792380
Entry
105792380         CDS       T04129                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
gra  Gossypium raimondii
Pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105792380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105792380
   03041 Spliceosome [BR:gra03041]
    105792380
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     105792380
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105792380
Spliceosome [BR:gra03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    105792380
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 105792380
NCBI-ProteinID: XP_012476380
UniProt: A0A0D2R972
LinkDB
Position
8:complement(56617076..56620604)
AA seq 482 aa
MAKKRKQRSSEPQPTKTTPDPQPIQQQPEYVPDEDPNPKVEEELQLQEVEEEVEVEEEVE
VEEEVEEEDDDDDDEEAQNQTLVGSSNANGAPKETGQEEDLDDEPFEKLLEPFGKDQLIT
LIRRAVDKHPEFISSVREFADADPSHRKIFVHGLSWDTTAETLTAEFCKYGEIEECKAVT
DRVSGKSKGYAFILFKHRSGARRALKQPQKKIGNRTTSCQLASQGPVPAPPPTAPPVSEY
TQRKIFVSNVSADLDPEKLLEFFKQYGEVEEGPLGLDKQTGKPKGFALFVYRSVESARKA
LEEPHKNFEGHVLHCQKAIDGPKSTKGGYGGGTSGGHHQQYQQHQHQQGHQIQSHFHHAK
KGKYSSGGSETGHLMAPSGPTAVGFNPGVAAGGFNPAAAAPALNPALGQALTALLAGQGG
LGLGNLLGGLSGAPVNQGTPAAGYGNQVAGGYGVQGGYQNPQMGQGGAGRNQPGSGAPYM
GH
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggccaaaaagcgaaagcaacgatcctccgaaccccaacccaccaaaacaacgccggat
cctcaaccaatccaacaacaacccgaatatgtacccgacgaagatccgaaccccaaagta
gaagaggaactgcaactacaggaagtggaagaggaagtagaagtggaagaagaagttgaa
gtagaagaggaagttgaagaagaagacgacgatgacgacgatgaagaagctcaaaatcaa
accctagtcggttcctctaacgccaacggagccccgaaagaaacgggtcaagaagaggat
ttggacgacgagccgttcgagaaacttctggaaccattcgggaaagatcaattgattacc
cttatcaggagagccgttgataagcacccggaatttatctcgtcagttcgggagttcgca
gatgcggacccgtcccatcggaagatcttcgttcatgggctaagttgggataccactgcg
gaaaccctcaccgccgaattttgtaagtatggggaaatcgaagaatgcaaagctgttacc
gatagggtttctgggaaatctaaaggttacgcctttattctatttaagcatcgtagtggg
gcacgccgggctttgaaacaaccccagaagaagattggaaatcgaactacttcttgccag
ttggcttcacaggggccggttccggcgccgcctcctacggctcctcctgtttccgagtat
actcaaaggaagatttttgttagcaatgtgtcagctgacttggacccggagaagttgctt
gagttttttaagcagtatggggaagttgaggaaggtccattggggctcgataagcagacg
gggaaaccaaaggggtttgccctttttgtatacaggtcggttgagagtgcgaggaaagcg
ttagaagagcctcataaaaattttgaaggtcatgttttgcattgccaaaaagccattgat
gggccgaaatcgactaaagggggttacggaggaggtacttccggtgggcatcatcagcag
taccaacagcatcagcatcagcaaggacatcagattcagtctcatttccatcatgctaag
aagggaaagtactcatctggtggatcagagactggtcatttgatggctccatctggacct
actgcagttgggttcaaccctggagttgctgctggtgggtttaaccctgctgctgctgca
cctgctttaaacccagcgcttggacaggctttgactgcattgcttgctggccagggtggt
ttggggcttggtaatctgcttggagggcttagtggcgcccctgtgaaccaagggacacct
gctgcagggtatgggaatcaggttgctggaggctatggagtgcagggtggatatcagaac
ccacagatgggtcagggcggcgctggtaggaatcaacctggtagtggtgctccttacatg
ggacattag

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