KEGG   Gossypium raimondii: 105792541
Entry
105792541         CDS       T04129                                 
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6
  KO
K10664  E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]
Organism
gra  Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:gra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gra04121]
    105792541
Enzymes [BR:gra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105792541
Ubiquitin system [BR:gra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    105792541
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-ANAPC11 zf-RING_16 zf-C3HC4_3 Prok-RING_1 zf-Nse Rtf2 zinc_ribbon_16 Prok-RING_4 RINGv Baculo_RING zf-RING_4 PHD PHD_NSD zf-RING-like zf_RING_Vps8 Tmpp129
Other DBs
NCBI-GeneID: 105792541
NCBI-ProteinID: XP_012476614
UniProt: A0A0D2PHR8
LinkDB
Position
8:complement(58472115..58473487)
AA seq 382 aa
MFSTAKHGIVFVLFLLLFLSPPPSTAQPTDPNNDRYPYARFTPSMAIIVVVLISALFFMG
FFSIYLRNCSEANANGSVVRPFNGETGRSRRGMRGLEPSVIETFPTMVYSEVKVHKIGKG
ALECAVCLNEFEDEETLRLIPKCDHVFHPDCIDAWLASHTTCPVCRANLAPQPGDPLSQP
AELDNTTTELDLEAQNHDDDSELEEERRINPNNINSDAEAQVAPEVEVIDLNRTLNRNRT
RGSISSRTRKFFFLRSHTTGHSLVQPGENTDRFTLRLPVDVRKQLINRKLNRATSLVLPR
ERSSRRGYRTGEDGGGSSRGKLFRSLDKSDGGVKSDRWVFSMTPPFFSRVSSTKSPKVTA
NNGEDTSSSPVEPAGDSSRPPV
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgttctccaccgccaaacatggaatcgttttcgttcttttcctcctccttttcctctct
ccgcctccctccaccgctcaacctaccgacccgaacaacgaccgttacccttacgcccgt
ttcaccccttccatggccatcatcgtggttgtcttgatttccgctttgttctttatgggt
tttttctctatttatcttcggaactgctccgaagccaacgccaacggaagcgtcgtccgc
cctttcaatggcgaaactgggcgttctcgccgtgggatgcgtgggcttgagccgtctgtg
atcgagacttttcccaccatggtttactccgaagtgaaagttcataagatcgggaaagga
gctttggagtgcgcagtttgcttgaacgagttcgaagatgaggaaacgctgcgtttaatc
cccaaatgcgaccacgttttccaccctgattgtatcgacgcttggttggcttctcatact
acctgccccgtttgtagagctaatctcgctcctcaacccggtgaccctctgagccaaccc
gccgagttggataacaccaccaccgagttggacctcgaggctcagaaccacgacgatgac
tcagaactggaagaagaaaggaggataaatcctaataatattaactccgatgcggaggct
caagttgcaccggaagttgaagtaattgacttgaaccgaactttaaataggaaccggaca
cgcggatcaatatcaagccgaacacgtaagttctttttcctgcgatctcacacaaccgga
cactctttggtccaaccaggtgaaaacacagaccggttcactttgcgattaccggttgat
gttcgaaaacagttaataaaccgaaagttaaatcgagcaacgagcttggtgttgcctagg
gaaagaagctcacggcgaggataccgaaccggagaagacggtgggggaagtagtagagga
aagctttttcgatcacttgacaaatctgatggcggagtcaagtcggaccggtgggtgttt
agtatgacaccaccgttttttagtagagtatcttccacgaagtcaccaaaggtaacagct
aataatggcgaagatacctcaagttcgccggttgaaccagcgggtgactcaagccgtcct
ccggtttaa

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