KEGG   Gossypium raimondii: 105792831
Entry
105792831         CDS       T04129                                 
Name
(RefSeq) uncharacterized protein LOC105792831
  KO
K03873  elongin-B
Organism
gra  Gossypium raimondii
Pathway
gra04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105792831
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gra04121]
    105792831
   03400 DNA repair and recombination proteins [BR:gra03400]
    105792831
Ubiquitin system [BR:gra04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     105792831
   Cul5 complex
     105792831
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     105792831
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N UBL_UBAC1 Ubiquitin_5 Ubiquitin_2 Rad60-SLD_2
Other DBs
NCBI-GeneID: 105792831
NCBI-ProteinID: XP_012477084
UniProt: A0A0D2P401
LinkDB
Position
8:61255037..61259419
AA seq 103 aa
MAMYIRVKRSKTTYFIQCDPTETTLDIKQKLHTLIDQPVNDQRLILMSNGDILEDSKTLA
DQKVENDAVVALTLRKDDNEFEDVNIVKPNDFYQSRDTDSGNW
NT seq 312 nt   +upstreamnt  +downstreamnt
atggctatgtacatccgtgtgaagcgtagcaagacaacttactttatccagtgtgatcca
actgaaactaccctagacattaagcaaaagttgcataccctcattgatcaacctgttaat
gatcagcgtttgatccttatgagtaatggggatatattagaggattcaaaaactttggca
gaccagaaggttgaaaatgatgctgttgtggcactgaccttgagaaaagatgacaacgag
ttcgaggatgtcaacatagtaaaaccaaacgatttctaccaatctcgtgacacagatagt
ggaaattggtaa

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