Gossypium raimondii: 105792889
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Entry
105792889 CDS
T04129
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
gra
Gossypium raimondii
Pathway
gra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105792889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105792889
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105792889
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105792889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
105792889
NCBI-ProteinID:
XP_012477184
UniProt:
A0A0D2PQG4
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Position
7:complement(37961232..37962336)
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AA seq
276 aa
AA seq
DB search
MGFLRSVKIREVWSDNLESEFELISRVIDDFPFVSMDTEFPGLVFRPKVDLTRPYHEQLL
RPSDHYKILKSNVDALNLIQVGLTLSDSSGNLPVLGTDDTQFIWQFNFCDFDVERDAHAP
DSIELLRRQGVDFEKNKENGIDSARFAELTMSSGLVCNDSVSWVTFHSAYDFGYLVKILT
RRDLPEGLDEFSRILRVFFGNKVYDVKHITRFCKSLYGGLDRLAQTLDVNRAVGKSHQAG
SDSLLTWHTFQKMRDVYFVNEGPEKHAGVLYGLEVL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttaagatctgtgaagataagggaagtttggtcggataatttagaatcagag
ttcgagctgatcagtcgggtaattgatgacttccctttcgtttccatggacactgaattt
cccggtcttgttttcagaccaaaagtggacctcactaggccttaccatgagcaactcctc
cgaccctccgatcattacaagatcctcaaatccaacgttgatgctctcaacttgatccaa
gtgggcctcactctctccgattcttcaggtaacctgccggttctcggaaccgacgacact
cagttcatctggcaattcaatttctgcgacttcgatgtggagcgtgacgctcacgcccct
gattccattgagcttttgaggaggcaaggggttgattttgagaagaacaaggaaaacggg
atcgactcggctcgattcgctgagttgaccatgtcctctggactcgtatgcaacgactca
gtgagttgggtgacgttccacagcgcgtatgatttcgggtacctggttaagatcctaacg
cgacgagacttgcccgagggcttggatgagttttcgagaattctgagggtgtttttcggg
aacaaagtttacgatgtgaagcacataacgagattctgcaagagcttgtatggtgggttg
gaccggctggctcaaacgttagatgtgaaccgtgcggttgggaaatctcaccaagccggg
tccgattctttgctgacttggcacacgtttcagaaaatgagggacgtgtattttgtgaac
gagggaccggaaaagcatgctggtgtattgtatggattggaagtattataa
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