KEGG   Gossypium raimondii: 105792899
Entry
105792899         CDS       T04129                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
gra  Gossypium raimondii
Pathway
gra03020  RNA polymerase
gra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105792899
  09124 Replication and repair
   03420 Nucleotide excision repair
    105792899
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gra03021]
    105792899
   03400 DNA repair and recombination proteins [BR:gra03400]
    105792899
Transcription machinery [BR:gra03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     105792899
  RNA polymerase III system
   RNA polymerase III
     105792899
  RNA polymerase I system
   RNA polymerase I
     105792899
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105792899
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N OB_RNR_1st NA-iREase1 DNA_pol3_alpha
Other DBs
NCBI-GeneID: 105792899
NCBI-ProteinID: XP_012477196
UniProt: A0A0D2S793
LinkDB
Position
8:complement(61706170..61709784)
AA seq 206 aa
MVLSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEINLSKQQFISKYGENMKREDLVINKTK
RNDNSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISSK
FHLEVFQEAELLVNVKEHALVPEHQVLTNEEKKTLLHRYTVKETQLPRIQVSDPIARYFG
LKRGQVVKIIRPSETAGRYITYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggtattgtcggatgatgaaatcaagaggctttttcgaattcgaaagactgtaatgcag
atgttgaaagataggggttatttcgttggagattttgagattaatttgtcaaaacaacaa
ttcatttccaaatacggcgaaaatatgaaaagggaggatcttgttatcaataaaaccaag
cggaatgataactctgatcagatctatgttttcttccctgaagaagccaaagttggtgtt
aagacaatgaagacgtataccaaccgaatgaaatcagagaatgtatttagggctatacta
gttgtgcaacagaatttaactccctttgctcgaacttgtataaatgaaatttcttcaaag
ttccatttggaggttttccaggaagcagagctcctggtcaatgtaaaagaacatgctctc
gtgcctgaacatcaggtgcttactaatgaggagaaaaagactttgcttcatagatatacc
gtaaaggaaacacagctgcctcgtatccaggtgagcgatccaatcgcaagatacttcggg
ctgaaacgtggacaagtggtgaagataatccggcctagtgaaactgccggtcgttatatc
acttaccgatatgttgtgtaa

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