Gossypium raimondii: 105793021
Help
Entry
105793021 CDS
T04129
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gra01001
]
105793021
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105793021
Enzymes [BR:
gra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105793021
Protein kinases [BR:
gra01001
]
Serine/threonine kinases: Other
Other
105793021
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105793021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
LisH
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Motif
Other DBs
NCBI-GeneID:
105793021
NCBI-ProteinID:
XP_012477403
UniProt:
A0A0D2MR40
LinkDB
All DBs
Position
8:complement(62579812..62589653)
Genome browser
AA seq
1989 aa
AA seq
DB search
MDDMSNQGQPPNRNPNSHPNPNQNEDQNQTEEQQPAEIEQQHHDEEEAEEEEDDEEEEEE
EEEEGRKEDEELMAKAQALMEKITSSPDNPNPTVLHALASLLETQESLFRCLEENGPSSS
NGRASHNVGQLGNLVRENDEFFDLISSKFLSESRYSTSVQAAAARLLLSCSVTWIYPHVF
EEPVLENIKAWVMNETPRFSIEDHNCKHDLPRNEASDAEILKTYSTGLLAVCLAGGGQVV
EDVLTSGLSAKLMRYLRVRVLGESTACQNDAFHLSESKSLSGAASFRSRDEGRGRVRQVL
ETTHIDDPRLIDEKPLDDHCPERDQERSTSRQSCGEECWVGDRQLSDGVGGGVYMHDVDA
DSEERWHIRDIRDGKLRYGEVDENGRDESSRRRINRGSARSKGKGRTSEGVMENEQSLTS
PGSGSRSGLQHSMRDRNLSKHLDARKVLEAKKFVGKTNADNVVVEREDNDECFQGCKVGS
KDFSDLVKKAVRAAEAEAMAASAPVEAIKAAGEAAAEVVKCAALEEFKTTNNEEAALLAA
SKAAATVVDAANAIEVSRDSTSTGSDPINKSAAETEGNEDVEEYFIPNVEVLSQLKERYC
IQCLETLGEYVEVLGPVLHEKGVDVCLALLQRSSKIEEASKATSLLPDVMKLICALAAHR
KFAALFVDRGGMQKLLAVPRVAQNCFGLSSCLFTIGSLQGIMERVCALPSDVVHQVVELA
IQLLECPQDQVRKNAALFFAAAFVFRAVLDAFDAQDGLQKLLGLLNDAASVRSGANSGSL
GLSGTTSFRNERSPSEVLTSSEKQIAYHACVALRQYFRAHLLLLVDSIRPNKSNRSGVRS
IPSTRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWPAVEKFLGCNGHITMLELCQ
APPVERYLHDLLQYALGVLHIVTLVPISRKMIVNATLSNNRAGIAVILDAANSASSLVDP
EIIQPALNVLINLVCPPPSISNKPSLLAQGQQFASGQTTNAPAVETRNAERNILDRAVFL
PNQSEMRERSGELNLVDRGTAAGTQSTSSIAQTSVSAAASGLVGDRRISLGAGAGCAGLA
AQLEQGYRQAREVVRANNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDETIAH
ILTKLQVGKKLSELIRDSGGLTPGTDQGRWQSELAQVAIELIAIVTNSGRASTLAATDAA
TPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLAETAASLLKEAQLTPLPSLAAP
ASLAHQASVQDAPSTQLQWPSGRTSGGFLSSRSKIAIRDEDINMKCDSTSSLKKKSLVFS
PTFGLQPKNHFYSQDSQPPSVRKTLASSKSSVSDTQTESMMKSNLDSELHCKTPLVLPMK
RKLSELKDTGSTLSGKRFNTGDHGPRSPVCLTPNSTRRNCLLADAAALTPTSILRDQHVR
ATPSSLIDLSEDNLCGSSNVGQMTPSQVGLLNDPQPSNSERLSLDTIVVQYLKHQHRQCP
APITTLPPLSLLHPHVCPMPKRSLDAPSNITSRLGTREFRSVYGGVHGNRRDRQFVYSRF
RPWRTCRDDAGSLLTCVCFLGDSSHIAVGSHAGELKIFDSNSNNVMDSCTGHQLPVTLVQ
SYFSGETQMVLSSSSQDVRLWDASSFSGGAMHSFEGCKAARFSNSGSSFAALSADSTQRE
ILLYDIQTYQLELKLSDASANSTGRGHVYSLIHFSPSDTMLLWNGVLWDRRVPDPVHRFD
QFTDYGGGGFHPAENEVIINSEVWDLRKFRLLRSVPSLDQTAITFNARGDVIYAILRRNL
EDVMSAVNTRRVKHPLFAAFRTLDAINYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQ
EEMFSSARVYEIGRRRPTDDDSDPDDAESDEDEDDDDDDDADVDPILGPDLNGDGESDAD
EMSSDDDSVSGLDDDDDDGDFITDDADFDGGGGILEIVTEGEDDDDDSQLVESFSSGEEE
DFVGNGFGF
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatgtcgaaccaagggcaaccgcccaatcgcaatcctaattctcatcccaat
cccaatcaaaatgaggaccagaatcaaacggaagagcagcaacctgcagaaatagagcag
caacatcacgacgaagaagaagcagaagaagaggaggacgacgaagaggaggaggaggaa
gaagaagaagaaggtaggaaggaagacgaggaattgatggcaaaagcgcaggctctcatg
gaaaagatcacttcttctcctgataaccctaatcctaccgtgctccatgctctcgcctcc
cttctcgaaactcaggagtctctttttagatgccttgaagagaatggtccttcttccagc
aatggtcgtgcctctcataatgttggacaactggggaacttagtcagggaaaatgatgaa
ttttttgatttgatatcatcgaagtttctttctgagagtagatattcaacctctgtccag
gcagcggctgctagacttcttctaagttgttctgtcacttggatttatcctcatgttttt
gaagaaccagttttggagaacatcaaagcttgggtaatgaatgagactcctagattttct
attgaagatcacaactgcaagcatgacttgccaagaaatgaagcctcggatgctgaaatt
ttgaaaacctattccactggacttcttgctgtgtgtttggcaggtggtggtcaagtggtg
gaagatgtcttgacttctggattgtctgctaagcttatgcgctatcttcgtgtacgagtc
cttggggagagtactgcttgtcaaaatgatgccttccatttatctgaaagcaagagtcta
tctggtgctgcttctttcagaagtagagatgaaggtcgaggcagggtgcggcaggttcta
gagacaactcatatagatgatcccagactaatagatgagaaaccattagatgaccattgt
cctgaacgggatcaagaacgaagcactagtcggcaatcatgtggagaggagtgttgggtt
ggtgacagacaactatctgatggggtgggagggggggtttacatgcatgatgtggatgct
gatagtgaggaaagatggcatattcgagatattcgtgatggaaaattgagatatggtgaa
gttgatgaaaatgggagagatgaatcctccaggcgcaggataaaccgtggttctgcaagg
tcaaagggtaagggaaggacttctgaaggggtcatggagaatgaacaatcactaacctca
ccaggctctggaagtcgttctggactgcaacatagcatgagagacagaaatttgtctaag
catttagatgcaagaaaggtgctggaggcaaagaagtttgtgggaaagactaatgctgat
aatgtggtagtggaaagagaggacaatgatgaatgctttcaaggatgcaaagttggaagt
aaagatttctctgatctggttaaaaaagcggttagagctgctgaagctgaagctatggca
gcaagtgcacctgttgaagccatcaaagcagctggtgaagctgcagctgaagttgtcaag
tgtgctgctttagaggagttcaaaactactaacaatgaagaagctgcattattggctgca
tccaaagcagcagctacagttgttgatgctgctaatgccattgaagtctcaagggactcc
actagcacaggttctgatccaataaataaaagtgctgcagaaacagaaggaaacgaggat
gttgaggagtattttattcccaatgttgaggtactttcacagttgaaagaaagatactgt
attcagtgccttgagactttaggtgaatatgttgaagtcctcgggcctgtattgcatgaa
aagggcgtagatgtctgtctagccctgttgcaacgaagttccaagattgaagaagcatca
aaggctacttctctcttacctgatgtgatgaagctaatttgcgctttagcagcccatcgg
aagtttgctgcattgtttgttgatcggggtggcatgcaaaaactgctcgctgttccaaga
gtggctcaaaattgttttggtctttcttcttgcttatttaccataggttccctacaggga
ataatggaacgtgtctgtgcacttccttctgatgttgttcaccaagtggttgagctagct
atccaacttcttgaatgtccgcaggatcaagttaggaaaaatgcagcactattttttgct
gctgcatttgtcttcagagcggtgcttgatgcttttgatgctcaagatggcttgcagaaa
ttattgggccttttaaatgatgctgcctcggtaagatctggggcaaattctggctcatta
ggcttgtctggaacaacatcatttcgaaatgagagatcaccgtcagaggtactgacttcc
tcagaaaagcagatagcttatcatgcatgtgttgctttgcggcaatacttcagagctcat
cttcttctgcttgtggattccatacgcccaaataaaagtaaccggagtggggtgcggagt
attccaagcaccagagcagcatacaagccacttgatattagtaatgaggctatggatgct
gtgtttctgcagttgcagaaggaccggaagctgggtcctgcttttgtgaggactcggtgg
cctgctgtcgagaagttcttaggatgtaatggacatattaccatgttggaattgtgtcag
gctccacctgttgagcgttacctacatgacttgttacagtatgcattaggtgttctgcac
attgttactttggtgcctataagccgcaagatgattgtaaatgccactttgagcaataat
cgtgctggtatagcagttattttggatgcagcaaatagtgctagtagtctcgtggaccct
gagattatacagccagctcttaatgtgttaattaacctagtttgtcctccaccttcaatc
agcaataaaccatcattactagctcaaggtcagcagtttgcttctggtcaaaccacaaat
gctcctgctgtggaaactagaaatgcagaacgtaatattttggatcgagctgttttcctg
cctaatcagagtgagatgagggaacgaagtggagagttgaatttggtagatagaggcact
gcagcaggcactcaatccaccagcagtattgctcaaacatctgtttctgctgctgcatct
ggtttggttggagatcgtagaatatctttaggtgccggagcaggttgtgctggccttgct
gcacaattagaacaaggatatcgtcaagcaagagaggttgtccgtgccaataatggcata
aaggttctactgcatctcctccaaccccgtatatattcacctcctgctgctttggattgc
cttcgggcccttgcatgccgagtcttgcttggtttagctagagatgagacaattgcacat
atattgaccaagcttcaggttggcaagaagctatcagaactgattcgagattcaggtggc
ctgacacctggaactgaccaaggcaggtggcaatctgaacttgctcaggtggcaattgag
ctaattgctattgttacaaattctgggcgtgctagtacgttggctgctacagatgctgct
acacctacattgagacgcatagagagagctgctattgctgctgcgactcctattacttac
cattccagggagcttttgcttctcatacatgaacatcttcaggcatctggtcttgctgaa
actgctgcttcacttctgaaagaagctcaattgacacctttgccatccttggctgcccct
gcatctcttgcccaccaagcctctgtgcaagatgctccttcaacacaactccagtggccc
tcaggtcgtacctctggtggatttctctccagcagatccaagattgctatccgagatgag
gatattaatatgaagtgtgattcaacttcatctttaaagaagaaatcacttgttttctct
cccacttttggattacaaccaaaaaatcacttctattctcaagattcccaacctccatct
gtcagaaaaacactcgccagttcaaaatcaagtgtttctgatactcagactgaatctatg
atgaaaagtaaccttgattcagaattgcactgtaagactcctcttgtgttgcctatgaaa
agaaagttatctgagttaaaggatactggttcaacattatcagggaagcggttcaacact
ggtgatcatggaccgaggtctccggtttgtctgacacccaattctactcgaagaaactgt
ctgcttgctgatgctgctgcattgacgccaacttctattttaagggatcagcatgttcga
gcaacaccaagcagcttaattgatttgtcagaggacaacctatgtggtagttctaatgtg
ggacagatgacgccttcccaagttggacttctaaatgatccccaacccagcaactcagaa
cgtttaagtctagacactatagttgttcagtatctaaagcatcagcatcgtcagtgccct
gctcctataacaacccttcctccactttctcttttgcatccacatgtttgtcctatgcca
aagagaagccttgatgcgccatcaaacatcacttcccgacttggtactcgtgagttcagg
agtgtttatggtggagtccatggaaatcgtagagatcgtcagtttgtttacagtagattc
aggccatggagaacttgcagggatgatgctggcagtttgttgacatgtgtctgttttctg
ggggactcctcccatattgcagttggcagccatgctggggagctaaaaatttttgattct
aacagcaataatgtaatggacagctgcacaggccaccagcttcctgtgactcttgttcag
tcatatttttctggtgagacccaaatggttctatcatcaagctctcaggatgtgcggttg
tgggatgcctcttctttctcaggtggggctatgcattcatttgaaggctgcaaggctgct
aggttcagcaattctgggagcagttttgctgccctatctgctgattctacccagcgagag
attctcctttatgatatccagacctatcagttggaattgaagctttctgatgcatcagct
aattctacgggtcgaggtcatgtatattctcttatacattttagcccatctgatactatg
ctgctttggaatggtgttttatgggaccggcgggttccagatccggttcatcgctttgat
cagtttacagattatggtggtggtggttttcatcctgctgagaatgaggttatcataaat
tctgaggtttgggatttgcggaagttcagactacttcgaagtgtaccttctttagatcaa
acagcaataaccttcaatgcacgtggggatgtaatttatgctatcctgaggagaaatctt
gaagatgtgatgtcagcagttaatacccgtcgcgtgaaacatcctttatttgctgctttc
cgcacattagatgccattaactactctgatattgcaactattccagtggatcgatgtgtt
cttgactttgcaactgaaccaactgattcctttgttgggttgattacaatggatgaccaa
gaagagatgttttcatcagccagggtttatgaaattggtcgccgaaggccgactgatgat
gattctgatcctgatgatgcagaaagtgatgaggacgaggatgacgacgacgacgacgat
gctgatgtagatccaatacttgggccagatctcaatggggatggtgagagtgatgcagat
gaaatgagcagtgacgatgatagtgtgagtgggcttgatgatgatgatgatgatggggat
tttatcacagatgatgcagactttgatggtggaggtgggatattggagattgtgactgag
ggtgaggatgatgatgatgacagccagttggttgaatcttttagcagtggtgaagaagag
gattttgtggggaatggttttggtttctaa
DBGET
integrated database retrieval system
