KEGG   Gossypium raimondii: 105793023
Entry
105793023         CDS       T04129                                 
Name
(RefSeq) protein RRC1 isoform X1
  KO
K12842  U2-associated protein SR140
Organism
gra  Gossypium raimondii
Pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105793023
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gra03041]
    105793023
Spliceosome [BR:gra03041]
 Complex A
  U2 snRNP components
   U2 related factors
    105793023
 Complex B
    105793023
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 CTK3 RRM_7
Other DBs
NCBI-GeneID: 105793023
NCBI-ProteinID: XP_012477405
UniProt: A0A0D2PK14
LinkDB
Position
8:62561555..62569947
AA seq 971 aa
MSSFSITRKKTPFQKHREEEEAKKKREEDETARLYEQFVASFQGDNAPGSKAFVRGGTIN
PNEKFKPDSEGEKAKDGVSVPKKGSRYVPSFIPPPLSAKGKESEKKKEEERPKEKEKGKS
RNIDHFMEELKHEQEMRERRNQDREHWRDGRHSDNSAPSSRFDELPDDFDPSGKLPGSFD
DGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMN
RADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGSSIILSGPS
GPPVTSVPNQNSELVLTPNVPDIMVPPPDDDHLRHVIDTMALYVLDGGCAFEQAIMERGR
GNPLFSFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWVPPPLPTTRSP
EHEKDYTATYAAGRSRWLEPERTLNDPQRDEFEDMLRALTLERSQIKEAMGFALDNADAA
GEIVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESF
NDLYRSVTGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRATFLRSGNSGVAHFHSIC
GNAPAIKNKISSEDAVNGIKANQDAALAMGKGAAMKELMDLPFAELERRCRHNGLSLVGG
REIMVARLLSLEDAEKQRNYELDDELKLRSSSSRYLSGQRGANAEPESVGLSEWTCFGED
EIHSEHKVSVPLAETFPVPQPELKAFTKKDKTDPVLPASKWAREDDDSDDEEKRSTRLSS
GSENAVDGPSKADELEFGTHMNTSAPSESAINEAQRKKLRRLEVALIEYRESLEERGTKN
AEDIERRVAVHRKRLESEYGLTDSGEDTSGRKRRDRRDDARDSASKRHRSESRSESPPRK
SSNRDRDRENGSEKEQERNRDRDRDRGRGQELESERGRERERDYREKSGSRERDDHDRDR
ARERDRRRRIN
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgagttcattttcgatcacgcgcaagaaaactcctttccagaagcacagagaagaggag
gaagccaagaagaagagggaggaggatgaaactgctcggttatacgagcagttcgtggct
tcttttcaaggagacaatgcacctgggtcgaaggcatttgttcgaggtggaacaatcaat
cccaatgagaaattcaagcccgattctgaaggtgaaaaggccaaagatggggtgtctgtt
ccaaagaagggaagtaggtatgttccatctttcataccacctcctttgtctgccaaggga
aaggaatctgagaagaagaaggaggaggagaggccaaaggaaaaagagaaggggaagtct
cggaacattgatcattttatggaggagctgaagcatgaacaagaaatgagggagagaaga
aatcaggatcgtgaacattggcgtgatgggcgtcatagtgacaattcagctccatccagt
cgctttgatgaactccctgatgattttgatcctagtggaaaactgcctggatcgtttgat
gatggtgatcctcaaacaacaaatctttatgttggaaatctctcaccaaaggttgatgaa
aattttcttcttcggacttttggaagatttgggcctattgctagtgtgaagattatgtgg
cctaggacagaggaagagcggcgacggcaaagaaattgtggctttgtagctttcatgaat
agagctgatggacaagctgcaaaagatgaaatgcaaggagttgttgtatatgaatatgag
ttgaaaatcgggtggggtaaatctgttgctcttccatcacaagcattacctgctccccca
cctggacacatggccatcaggagtaaggagggtagttctataatcttatccggtccttca
ggcccaccagtgacatctgttccaaatcagaactctgaattggttcttacaccaaatgtt
ccagatataatggttccaccccctgatgatgaccatcttcgccatgtcattgatacaatg
gctctttatgttcttgatggaggatgtgcttttgaacaagctattatggagaggggtcgt
ggcaatcctctattcagctttttgtttgagcttggctcaaaggaacatacttactatgtc
tggagattatattctttcgctcagggtgatacacttcaaaggtggcggacggaacctttt
atcatgataactggtagtggaagatgggtaccacctcctctgccaactacaagaagtcca
gagcatgaaaaggactacactgccacatatgctgcaggaagaagcaggtggctggagcca
gaacgaacacttaatgatcctcaaagggatgaatttgaggatatgctacgagccttgact
ttagagaggagtcagattaaggaagctatgggatttgctttggataatgctgatgctgct
ggggagatagttgaagttttgaccgagtccttgacacttaaagagacaccaattccgact
aaagttgcaaggcttatgctcgtctctgacatccttcataacagcagtgctcctgttaaa
aatgcatctgcataccgtaccaaatttgaagcaacgttgcctgatataatggagagcttt
aatgatttgtaccgcagtgtgacgggaaggatcacagccgaggcccttaaggaaagggtt
ctgaaagtgttgcaagtatggtcagactggtttcttttttcagatgcatatgtgaatgga
ctgcgagctacttttcttcgatcaggaaactctggtgtggcccattttcattctatatgt
ggtaatgctccagcaattaaaaataagattagttcagaagatgcagttaatgggattaag
gccaaccaagatgctgctttggcaatgggcaaaggtgcagctatgaaggagctaatggat
ctcccatttgctgagctggagagacgttgtagacataatggattgtctcttgttggtggt
agagaaataatggttgctcgactattaagtttggaagatgcagaaaagcagaggaattat
gaactagatgatgagctgaagcttcgatctagttctagtaggtatcttagtggtcagaga
ggtgcaaatgctgagccagagtctgtgggattgtctgaatggacctgttttggagaggat
gagatccattcagaacacaaagtttctgtacctttggctgaaacctttccagtcccacag
cctgaactaaaagcattcacgaagaaagataaaacggatcctgttttgccagcctctaaa
tgggctagagaggatgatgacagtgatgatgaagaaaagagaagcactcggttgtcttct
ggaagtgagaatgctgttgatggccctagtaaggctgatgaattggagtttggaactcat
atgaacacttcagctccatctgaaagtgcaatcaatgaagcgcagaggaagaagttgaga
cgtttggaggttgctttgatagaatatcgagaatcccttgaggagcggggaactaaaaat
gccgaggatattgagagaagggttgctgttcaccgaaaacggctagaatctgaatatggt
ttaacagattctggtgaagatacttcaggaagaaagaggagagataggcgggatgatgca
cgtgactctgcaagcaagcggcaccgcagtgaaagccgaagtgagagccctccgcggaaa
tcatcaaacagagacagggatagagaaaatggttcagaaaaggagcaagaaaggaacagg
gatagagatagggatagaggtagaggtcaagaactggaaagtgaaagggggagagaaagg
gagcgagactatcgtgaaaagagtggaagcagggaaagggatgatcatgacagggataga
gccagagagagggataggagaaggcgaataaattga

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