Gossypium raimondii: 105793377
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Entry
105793377 CDS
T04129
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
gra
Gossypium raimondii
Pathway
gra04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105793377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105793377
Membrane trafficking [BR:
gra04131
]
Endosome - Golgi transport
Others
AP-4 complex
105793377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
INTS1_R4
HEAT
HEAT_2
HEAT_EZ
TOR1L1_N
PDS5
NPHI_C
V-ATPase_H_C
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
105793377
NCBI-ProteinID:
XP_012477745
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All DBs
Position
8:48631230..48642612
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AA seq
998 aa
AA seq
DB search
MDAKSYAICFKPSSSALKRSNTTRNWYRVAKLEQLKTIGRELTKGSQGGFYQSKEFLDLV
KSIGEARSKAEEDRIVLSEIETLKRRISEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIH
AVKMIHDDSLLVKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCKL
INEETIPAVLPQIVELLAHPKEAVRKKAIMALHRFYQKSPSSVSHLVSNFRKRLCDNDPG
VMGATLCPLFDLITNDVNSYKDLVISFVSILKQVAERRLPKAYDYHQMPAPFIQIKLLKI
LALLGSSDKQASENMYTVVGDIFRKCDSSSNIGNAVLYECICCVSSIYPNPKLLESAADA
ISRFLKSDSHNLKYMGIDALGRLIKISPEIAEQHQLAVIDCLEDPDDTLKRKTFELLYKM
TKSTNVEVIVDRMIDYMNSINDNHYKTEIASRCVELAEQFAPSNQWFIQTMNKVFEHAGD
LVNIKVAHNLMRLIAEGFGEDDDTADSQLRSSAVESYLHILGEPKLPSVFLQVICWVLGE
YGTADGKYSASYITGKLCDVAEAYSNDETVKAYAVTALMKIYAFEIAAGRKVDMLPECHS
LMEEFLASHSTDLQQRAYELQAVIGLDAHAVESILPSDASCEDIEVDKALSFLNDYIQEA
IEKGAQPYIPESERTGMLNISNFRNQDHHEASSHGLRFEAYELPKQTVQARIPPASLAST
ELVPVPEPMYPRESYQTTTVPSVSSDAASTELKLRLDGVQKRWGRQTHFPSTSTSNSTSL
KTVNGITQVDGSNTANSRTRETYDSRKQVEISPEKQKLAASLFGGPSKTEKKSATGHKSS
KPSSHMVKSHAPKSSMEVASEKTSVQQPPDLLDFGEPTVKSTAPSLDPFKDLEGLLEPTT
QVSSAVNHSSTAAVTKSPDIMGLYTETTAGAHHKDSDILSGLSNPPMTNMVGGTTTMQVA
QSSKGPNLKDSLEKDALVRQMGVTPSSQNPNLFKDILG
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaagtcttatgccatttgttttaaaccttcaagcagtgctctcaagcgttcc
aatactacaagaaattggtacagagtagccaagctggagcaattgaagacgattggtagg
gagctcaccaagggctcccaaggcggattctaccaatccaaagaatttctggatctggtg
aagtccattggcgaggctcgatccaaggccgaagaggaccgaattgttctcagcgagatc
gagactctcaaacgccgcatctccgagcccgacatacccaagcgcaagatgaaagagtac
atcatcagattggtttacgtcgagatgctcggtcacgatgcttccttcggttacattcac
gccgttaagatgattcacgatgatagcctcctcgtcaaacggaccggttacttggccgtt
acgctcttcttaaacgaagatcatgatttgatcattttgattgtcaataccatccagaaa
gatttgaagtctgacaattacttggtggtctgcgccgccttgaatgccgtttgcaagttg
atcaatgaggagacaattcctgccgtcttgccgcagattgtggagttgctcgcacatcct
aaggaggctgtacggaagaaggccatcatggctctccatcggttttatcagaaatcccct
tcttctgtttcgcatctcgtctccaattttcgcaagagactttgtgataatgatcctgga
gttatgggtgcaactctttgcccactttttgatcttataacaaatgatgttaattcttac
aaagatttggtcatcagctttgtaagcattcttaaacaagttgctgaacgcagactacct
aaggcttatgattaccatcagatgccagctccatttattcagatcaaattgttgaaaatt
ctggcattgcttggaagcagtgacaagcaagcaagtgaaaacatgtataccgtagtggga
gacatattcagaaaatgtgattcatcaagtaatataggaaatgctgtactctatgagtgc
atatgctgtgtttcctctatatatcccaatcccaagttattagagtctgcagcggatgct
atatccagatttttaaagagtgacagtcataacctaaaatacatgggcattgatgctctt
ggccgattaataaagataagtccagagattgctgagcaacatcagttggctgttattgat
tgcttagaggacccagatgatactctgaagagaaaaacctttgaactactgtacaaaatg
accaagtctacaaatgtggaggttattgttgatcgcatgattgattacatgaatagcatc
aatgacaatcattataaaactgaaatagcatctcgatgcgttgaacttgcggagcaattt
gcaccgagcaatcaatggttcattcagaccatgaataaagtttttgagcatgcgggagat
ctagtcaatattaaggtagcgcacaatttgatgcggttgattgctgagggatttggagag
gatgatgatactgcagacagtcaactgagatcatctgctgtggagtcatacttgcacatt
cttggtgaaccaaagctgccatccgtttttcttcaagtaatttgctgggtcttaggggaa
tatggaacagctgatggaaagtactctgcttcctatattactgggaagttatgtgatgtg
gcagaggcatattcgaatgatgagactgttaaggcatatgcagttacagccctcatgaaa
atatatgcatttgaaatagcagcggggaggaaagtagatatgctgcctgagtgtcattct
ttaatggaagaatttttggcttctcactcgacagatttacagcaacgggcctatgaattg
caagctgtgattggccttgatgctcatgctgttgagagtattctgccatcagatgcaagt
tgtgaagatattgaggttgataaagccctttccttccttaatgattatatccaagaggca
attgaaaaaggtgctcagccctatattcctgagagtgaacgcactggaatgttaaatatc
agcaattttaggaatcaagatcaccatgaagcttcgtcacatggtctcaggtttgaggca
tatgagcttccaaagcaaacagtgcaagcgaggattcctcctgcatcacttgcttcaact
gaacttgttccagtgccagagccgatgtatcctagggaaagctaccagacaactactgtg
ccatctgtatcatcagatgcagcatcaacagagctcaagctacgactagatggagtccaa
aaaaggtggggtaggcaaacacactttccctcaacatctacctcaaattccacatccctg
aaaacagttaatggtatcacgcaagttgatgggtcaaatactgcaaattcaagaacacgt
gaaacctatgattctaggaaacaagttgaaatatctccagaaaagcagaaactggctgct
tcgctgtttggaggtccatcaaaaacagaaaagaagtcggctactggtcataagagttca
aagccaagcagccacatggtgaagtctcatgcgccgaagtctagtatggaagttgcttca
gaaaaaacatctgttcaacaacctccggacttgcttgattttggagaaccaactgtcaaa
agtactgctccttcactagatccatttaaagatctggagggtcttcttgagccaacaact
caagtttcttcagcagtgaatcatagttcaacggctgcagttacgaagtcccctgatata
atgggattgtacacagagacaactgctggcgcacaccataaagacagtgatattttatct
ggcttgtcaaatccgccaatgacaaatatggttggtggcactacaaccatgcaagtagct
caaagtagtaagggccccaaccttaaagattcattggaaaaggatgcactggttaggcag
atgggtgttactccatcgagtcagaatccaaacttgtttaaagatatactcgggtga
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