Gossypium raimondii: 105793852
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Entry
105793852 CDS
T04129
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b
KO
K11088
small nuclear ribonucleoprotein D3
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105793852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105793852
03041 Spliceosome [BR:
gra03041
]
105793852
03032 DNA replication proteins [BR:
gra03032
]
105793852
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
105793852
Spliceosome [BR:
gra03041
]
Complex A
U1 snRNP components
Sm proteins
105793852
U2 snRNP components
105793852
Complex B
U1 snRNP components
105793852
U4/U6.U5 tri-snRNP components
105793852
Complex C
U2 snRNP components
105793852
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
105793852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF6897
Motif
Other DBs
NCBI-GeneID:
105793852
NCBI-ProteinID:
XP_012478166
UniProt:
A0A0D2NAV0
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All DBs
Position
3:21386658..21388375
Genome browser
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMVECEDNWNCQLENITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDAKIKGKSSSLGVGRGRAVAMRAKAQAAGRGT
TGGRGVVPSVRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagccggagcttgggcataccggtgaagctactgcacgaggcatccggccacgtggta
acggtggagcttaagagcggagagctttacagaggaagcatggtcgaatgcgaggataac
tggaattgccagctcgagaacatcacctacaccgctaaagatggaaaggtatcacagctt
gagcatgttttcattcgaggcagtaaagtcaggtttatggtcataccggacatgttgaag
aatgctcccatgttcaaacgcctcgatgctaaaatcaagggtaagagctcatctctagga
gttggcagaggtagagctgttgcaatgagagccaaagctcaagctgccgggcgtggcaca
acaggtggtagaggcgttgtgccttcggttcgtaggtaa
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